Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0786
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   251   4e-69
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   251   4e-69
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   206   1e-55
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.15 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  251 bits (615), Expect = 4e-69
 Identities = 115/163 (70%), Positives = 145/163 (88%)
 Frame = +3

Query: 3   FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
           FDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ N RALRRLR
Sbjct: 33  FDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLR 92

Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
           T CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DA
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDA 152

Query: 363 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 491
           K+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 153 KIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  251 bits (615), Expect = 4e-69
 Identities = 115/163 (70%), Positives = 145/163 (88%)
 Frame = +3

Query: 3   FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
           FDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ N RALRRLR
Sbjct: 33  FDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLR 92

Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
           T CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DA
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDA 152

Query: 363 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 491
           K+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 153 KIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  206 bits (503), Expect = 1e-55
 Identities = 94/163 (57%), Positives = 132/163 (80%)
 Frame = +3

Query: 3   FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
           FDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD+  +K+AL++LR
Sbjct: 32  FDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLR 91

Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
              E+AKR LSS  + ++ I++L    DF  ++TRA+FEELN D F  T++PV+K L DA
Sbjct: 92  REVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDA 151

Query: 363 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 491
            M K QI +IVLVGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 152 DMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 384 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 283
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 435 LLQDFFNGKELNKSINPDE 491
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 399 PVQYRGFEPYPSWHHGETSPLAP 331
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 52 PPPATPTWEVRTL 90
          PP   PTW VR L
Sbjct: 13 PPQEMPTWFVRWL 25


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 425 LGDTSGATHQYNIVDLSLIHLGITE 351
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 425 LGDTSGATHQYNIVDLSLIHLGITE 351
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,409
Number of Sequences: 336
Number of extensions: 3713
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)