Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0786
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 334 4e-92
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 1e-88
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 318 3e-87
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 234 6e-62
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 127 8e-30
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 96 2e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 74 1e-13
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 30 1.6
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 2.1
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.8
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.5
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.5
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 6.5
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 28 8.6
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 8.6
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 334 bits (821), Expect = 4e-92
Identities = 164/234 (70%), Positives = 184/234 (78%), Gaps = 2/234 (0%)
Frame = +3
Query: 3 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
FDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+RRLR
Sbjct: 205 FDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLR 264
Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDS 324
Query: 363 KM--DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 536
K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE ILHG
Sbjct: 325 KIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHG 384
Query: 537 DKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQP 698
DK + V+D GIETAGGVM+ LIKRN YSDNQP
Sbjct: 385 DKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQP 438
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 323 bits (793), Expect = 1e-88
Identities = 158/232 (68%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
Frame = +3
Query: 3 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
FDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKRALRRLR
Sbjct: 298 FDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLR 357
Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
TACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+
Sbjct: 358 TACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDS 417
Query: 363 KMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 539
K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE ILHGD
Sbjct: 418 KLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGD 477
Query: 540 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 695
KSE QD G+ETAGGVMT IKRN YSDNQ
Sbjct: 478 KSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQ 529
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 318 bits (781), Expect = 3e-87
Identities = 155/236 (65%), Positives = 182/236 (77%), Gaps = 1/236 (0%)
Frame = +3
Query: 3 FDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRL 179
FDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRL
Sbjct: 205 FDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRL 264
Query: 180 RTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRD 359
RTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L D
Sbjct: 265 RTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSD 324
Query: 360 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 539
AK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE IL GD
Sbjct: 325 AKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGD 384
Query: 540 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPRST 707
KS+EV+D GIETAG VMT LI+RN YSDNQP T
Sbjct: 385 KSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVT 440
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 234 bits (572), Expect = 6e-62
Identities = 116/231 (50%), Positives = 156/231 (67%)
Frame = +3
Query: 3 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
FDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ + RA+++LR
Sbjct: 902 FDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLR 961
Query: 183 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 362
E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA
Sbjct: 962 REVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDA 1021
Query: 363 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 542
+ K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE +L G+
Sbjct: 1022 DLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGE- 1080
Query: 543 SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 695
E+ + GIET GGVMT LI RN +DNQ
Sbjct: 1081 -EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQ 1130
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 173 bits (421), Expect = 1e-43
Identities = 95/217 (43%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Frame = +3
Query: 3 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLR 182
FD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ + AL+RLR
Sbjct: 12 FDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLR 71
Query: 183 TACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKS 350
A E+AK LSSS Q I + + ++R++FE L ADL T+ P +K
Sbjct: 72 EAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKC 131
Query: 351 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 530
L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L
Sbjct: 132 LQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVL 190
Query: 531 HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRN 641
GD V+D GIET GGV T LI RN
Sbjct: 191 AGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRN 223
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 127 bits (307), Expect = 8e-30
Identities = 61/166 (36%), Positives = 109/166 (65%), Gaps = 5/166 (3%)
Frame = +3
Query: 6 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRT 185
DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T ++RLR
Sbjct: 235 DVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCSEDIQRLRQ 293
Query: 186 ACERAKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKS 350
E AK L+ + + +I++ SL EG + F +I+R FE +N DLF+ ++P+ +
Sbjct: 294 EVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRV 353
Query: 351 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 488
L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 104 bits (250), Expect = 6e-23
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Frame = +3
Query: 45 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSS 218
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 219 STQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVL 398
+ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VL
Sbjct: 261 NNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVL 320
Query: 399 VGGSTRIPKVQKLLQDFFNGKELNKSINPDE 491
VGG R+PKVQ L EL K+IN DE
Sbjct: 321 VGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/121 (42%), Positives = 74/121 (61%)
Frame = +3
Query: 279 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 458
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 459 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 638
+ +K++NPDE +L GD V+D GIET GGV T LI R
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITR 167
Query: 639 N 641
N
Sbjct: 168 N 168
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 85.8 bits (203), Expect = 3e-17
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +3
Query: 9 VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTA 188
V I G +V STA + +LGG DFD +V HF QEFK KYK D+ ++ +A +L
Sbjct: 267 VCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAE 326
Query: 189 CERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 365
CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL + P+ +L A+
Sbjct: 327 CEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQ 384
Query: 366 MDKAQIHDIV 395
K + ++V
Sbjct: 385 SGKYSVKNVV 394
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 6 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDLATNKRAL 170
DV++L++ +G+++V +T D LGG +FD +++ +FKR K+K D TNKR+
Sbjct: 167 DVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSK 226
Query: 171 RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 287
+L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 227 TKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/63 (36%), Positives = 40/63 (63%)
Frame = +3
Query: 366 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 545
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 546 EEV 554
++
Sbjct: 95 ADM 97
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 378 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 491
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 110 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 202
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 596 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEIL 441
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -2
Query: 650 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 516
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 101 GEPLCPGVQEEIQKGPRYQQESS*AFAYCM 190
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 110 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 202
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 599 NTEGKGCYIKQQQILHLL--RLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLH 426
+ EG G ++Q ++ L ++ VQ +S D C +YG+V + L S +E L+ LH
Sbjct: 463 HVEGAGFRERKQVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLH 521
Query: 425 LGDTSGATHQ 396
L T T Q
Sbjct: 522 LLQTMWETMQ 531
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +3
Query: 102 VNHFVQEFKRKYKKDLATNKRA-LRRLRTACERAKRTLS----SSTQASIEIDSLFEGID 266
VNH + +++K D+A++ A L + E+ K +++ S Q ++++ EGI+
Sbjct: 942 VNHLTKPILKEFKTDMASSINATLSHINRRFEKIKSSVTHKHRSLKQCVSQLNAFEEGIE 1001
Query: 267 FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 365
+ L A ST+E VE+ L K
Sbjct: 1002 EELEWMDKALDALAAYKNLSTVEEVEQELSKYK 1034
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 110 LCPGVQEEIQKGPRYQQESS*AFAYCM 190
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 110 LCPGVQEEIQKGPRYQQESS*AFAYCM 190
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 240 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 359
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +3
Query: 132 KYKKDLATNKRALRRL-----RTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 296
K KKDLA K L L RT E KRT+ Q ++ + E T A F
Sbjct: 233 KTKKDLAETKNQLTALTSNEIRTINENTKRTVDGLEQKMAKVMADCEAARASQDATLAEF 292
Query: 297 EELNADLFRSTMEPVEKSLRDAKMDKAQ 380
E + + K + MD ++
Sbjct: 293 ENYKTRVHSVLKQQKTKPVHSPDMDPSE 320
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +3
Query: 96 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 275
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 276 SITRARFEELNADL 317
+ T R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 643 LPSPLNRLRHSPPTLITNP 699
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 273 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 443
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,929,423
Number of Sequences: 59808
Number of extensions: 523855
Number of successful extensions: 3990
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3977
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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