Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0786
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.5  
AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    23   9.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.5  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 112 KWFTMRLSKSSPPKWVSPAVDFTSKIPSS-MVRMDTS 5
           +WF  +++ S+  +WV+   +   ++  + +VR+D S
Sbjct: 426 RWFAQQITSSTDARWVAIQGNPVVRVQKTVLVRLDRS 462


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 396  VQYRGFEPYPSWHHGE 349
            + Y GFEPY   H G+
Sbjct: 1335 ISYYGFEPYERNHFGK 1350


>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein
          70 protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 3  FDVSILTIEDG 35
          FDVSILTI++G
Sbjct: 65 FDVSILTIDEG 75


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 628 SSSVTLPSPLNRLRHSPPTLITNPGVL 708
           SS VTL  P N + + PP + +  G L
Sbjct: 210 SSIVTLDLPQNTIDNLPPAIFSGLGKL 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,913
Number of Sequences: 2352
Number of extensions: 15645
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)