Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0784
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    46   3e-07
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    27   0.17 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +3

Query: 249 LLGKGGFSEVHKAF-DLKEQRYTACKVHQLNKDWKEDKKANYIKHALREYNIHKAL-DHP 422
           ++G+G F  V +AF DLKE   T   V  L    KE   +  I+   +E NI K++  HP
Sbjct: 456 VIGEGAFGIVRRAFLDLKEDNKTQVAVKML----KESPTSEEIRQFTQEINIMKSVRQHP 511

Query: 423 RIVKLYD-VFEIDGNSFCTVLEYCNGHDLDFYLK 521
            IV L   V E        V+EYC+  DL  YL+
Sbjct: 512 YIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTYLR 545



 Score = 35.9 bits (79), Expect = 4e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 534 IPEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSQVMD 713
           I  +   SI  QV   +++L   K  V+H DL   N+L+ E +    +K++DFGLS+ + 
Sbjct: 589 IQPKHLLSIARQVALGMEHL--AKTRVVHRDLAARNVLVCENHT---VKVSDFGLSRDVY 643

Query: 714 EEN 722
           ++N
Sbjct: 644 QDN 646


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +2

Query: 653 GRQCLWRDQ------DYRLWPLPSNGRGELQS*PGMDLTS 754
           G  CLW +Q      D RLWP  +     + S P +D+TS
Sbjct: 550 GEACLWSEQFDETSLDTRLWPRAAAFAERVWSDPQLDVTS 589


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -3

Query: 487 YSSTVQNEFPSISNTSYSFTMRG*SKALWMLYSRSAC 377
           YS T+ N +    N  YSF  +      W L  +  C
Sbjct: 189 YSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPKQEDC 225


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 487 YSSTVQNEFPSISNTSYSFTMRG*SKALWMLYSRSACLI 371
           YS T+ N +    N  YSF  +      W L ++    I
Sbjct: 198 YSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPNKRTVFI 236


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +1

Query: 466 RFVQYLNTVMDMISTFISNSTKQSRSVRRV 555
           +F++++  V++     +SN TKQ   +  +
Sbjct: 464 KFIEFIRKVLEFDVKCVSNYTKQQSKIHLI 493


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -2

Query: 530 FVLFEIKVEIMSITVFKYCTKRISVDFEYIVQFYDARVIQGFMDVVL 390
           FV + I V   +++ F+Y  ++I +  +    ++D  VI  F+ + L
Sbjct: 192 FVSYNIYV-CQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFL 237


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -2

Query: 530 FVLFEIKVEIMSITVFKYCTKRISVDFEYIVQFYDARVIQGFMDVVL 390
           FV + I V   +++ F+Y  ++I +  +    ++D  VI  F+ + L
Sbjct: 118 FVSYNIYV-CQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFL 163


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 730 LTWHGLDQPGSRY 768
           L WHG+ Q GS+Y
Sbjct: 199 LHWHGVWQRGSQY 211


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 730 LTWHGLDQPGSRY 768
           L WHG+ Q GS+Y
Sbjct: 199 LHWHGVWQRGSQY 211


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 233 VFTADAAWQGWIQ 271
           + T DAA +GWIQ
Sbjct: 236 LLTVDAAIRGWIQ 248


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +3

Query: 585 KYLNEIKPPVIHYDLKPGNILLTEGNVC 668
           KY   +      +  +PG +  T+ N+C
Sbjct: 490 KYYRCVHGKPTEFACRPGTVFHTQSNIC 517


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,274
Number of Sequences: 336
Number of extensions: 4096
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)