Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0784
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    43   1e-05
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            35   0.002
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       31   0.030
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      29   0.16 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.28 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.1  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.6  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      23   7.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 42/155 (27%), Positives = 68/155 (43%)
 Frame = +3

Query: 249  LLGKGGFSEVHKAFDLKEQRYTACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRI 428
            +LG G F  V K   + E    + K+    K   E   +   K  L E  I  +++HP +
Sbjct: 839  VLGMGAFGRVFKGVWMPEGE--SVKIPVAIKVLMEMSGSESSKEFLEEAYIMASVEHPNL 896

Query: 429  VKLYDVFEIDGNSFCTVLEYCNGHDLDFYLKQHKTIPEREARSIVMQVVSALKYLNEIKP 608
            +KL  V         T L    G  LD+       I  +   +   Q+   + YL E + 
Sbjct: 897  LKLLAVCMTSQMMLITQLMPL-GCLLDYVRNNKDKIGSKALLNWSTQIARGMAYLEERR- 954

Query: 609  PVIHYDLKPGNILLTEGNVCGEIKITDFGLSQVMD 713
             ++H DL   N+L+   + C  +KIT FGL++++D
Sbjct: 955  -LVHRDLAARNVLVQTPS-C--VKITVFGLAKLLD 985


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
 Frame = +3

Query: 411 LDHPRIVKLYDV---FEIDGNSFCTVLEYCNGHDLDFYLKQHKTIPEREARSIVMQVVSA 581
           ++HP I++        ++    F  +  YC    L  +LK H T+   E   I   +   
Sbjct: 169 MNHPNILEFIGCEKRSDMASTDFWLITAYCENGSLCDFLKAH-TVSWTELCKIATTMARG 227

Query: 582 LKYLNE---------IKPPVIHYDLKPGNILL-TEGNVCGEIKITDFGLSQV 707
           L +L+E         +KP + H D K  N+LL  +   C    I DFGL+ V
Sbjct: 228 LTHLHEEIQSSRTDGLKPSIAHRDFKSKNVLLKADLTAC----IADFGLALV 275


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 31.5 bits (68), Expect = 0.030
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +3

Query: 597 EIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSQVMDEENYN 728
           E KP + H DLK  NIL+     C    I DFGL+ VM  +  N
Sbjct: 270 EGKPAIAHRDLKTKNILIRANGTC---VIADFGLA-VMHSQTTN 309


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 603 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 701
           KP + H D+K  NIL+     C    I DFGL+
Sbjct: 380 KPSIAHRDIKSKNILVKRNGQCA---IADFGLA 409


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 11/50 (22%), Positives = 30/50 (60%)
 Frame = +3

Query: 84  RQSALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFSQHPVLSER 233
           +++ L+K++AD    +++   E+ +H +  K  HNE +++  +   +S++
Sbjct: 207 KEARLEKQEADRYASLKQECSEKQVHFQLFKLYHNEKEAKRLKEDQISKQ 256


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 96  LKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFSQHPVLSER 233
           L+++  +L+  +++L  +      ELKR+H +  S   Q P L E+
Sbjct: 789 LQEQQGELEATIQRLTAKLKQQEMELKRMHMDVASLTQQMPRLKEQ 834


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 603 KPPVIHYDLKPGNILLTEGNVCGEIKITDFGLS 701
           KP + H DLK  NIL+     C    I D GL+
Sbjct: 180 KPAIAHRDLKSKNILVKSNLTC---CIGDLGLA 209


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 26/97 (26%), Positives = 47/97 (48%)
 Frame = +3

Query: 165 RELKRIHNEDQSRFSQHPVLSERYLLLMLLGKGGFSEVHKAFDLKEQRYTACKVHQLNKD 344
           +E KRI+ E + +  +    + R L L+LLG G   E  K+  +K+ R     +H     
Sbjct: 10  KEQKRINQEIERQLRRDKRDARRELKLLLLGTG---ESGKSTFIKQMRI----IH--GSG 60

Query: 345 WKEDKKANYIKHALREYNIHKALDHPRIVKLYDVFEI 455
           + ++ K  +IK  L   NI  A+    +++  D+ +I
Sbjct: 61  YSDEDKRGFIK--LVYQNIFMAMQ--SMIRAMDLLKI 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,487
Number of Sequences: 2352
Number of extensions: 18049
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)