Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0781
(710 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 1.8
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 25 3.1
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 3.1
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 3.1
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 4.1
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 4.1
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 4.1
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 4.1
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 7.2
AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding pr... 23 7.2
AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding pr... 23 9.5
AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding pr... 23 9.5
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 615 LHGTHLRHEVEQRVHNRQGHEGVHLAAA 698
L+ +HL H + H+ G EGV + A
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA 1336
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 142 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNE 270
++TG ++LK KQ+L +DG + ++ D+ I++ E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 4.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 4.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 4.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 24.2 bits (50), Expect = 4.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 647 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 534
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 423 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 334
AD AA +RY + + RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512
>AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding
protein protein.
Length = 155
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 6 EALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 146
++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 35 QSLTQADMDEIAKGMRKVCMSRPKISEEMANYPSQGIFPDDKEFKCY 81
>AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP6 protein.
Length = 155
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 6 EALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 146
++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 35 QSLTQADMDEIAKGMRKVCMSRHKISEEMANYPSQGIFPDDQEFKCY 81
>AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding
protein AgamOBP18 protein.
Length = 151
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 6 EALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 146
++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 31 QSLTQADMDEIAKGMRKVCMSRHKISEEMANYPSQGIFPDDKEFKCY 77
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,836
Number of Sequences: 2352
Number of extensions: 19547
Number of successful extensions: 96
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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