Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0757
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.9  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.9  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 394 SPHALNSGRRELELYDVIFQEVCHTVYEPRLDLC 293
           SP    +G+   E+ D+I  +VC  + E  L  C
Sbjct: 325 SPFPPVAGKTSTEVLDIIHSDVCGPMEETTLGGC 358


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 587 ASKHTETSYEVVAHPHHEEHYASSG 661
           +S+H + +++   H HH +H    G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 587 ASKHTETSYEVVAHPHHEEHYASSG 661
           +S+H + +++   H HH +H    G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 587 ASKHTETSYEVVAHPHHEEHYASSG 661
           +S+H + +++   H HH +H    G
Sbjct: 224 SSQHQQPTHQTHHHHHHHQHGGGVG 248


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 418 EEEDQAAPPSLGHR--QTKDHGPHPPILGYHRLRSRQSRRTC 537
           +E+ + APP  GHR  +T+           H  R++++   C
Sbjct: 167 QEKTRNAPPERGHRCGRTESDNAKTRRRARHNTRTKKAAEAC 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,108
Number of Sequences: 2352
Number of extensions: 11070
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)