Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0721
(706 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1505|AAO41167.1| 837|Drosophila melanogaster CG13388-P... 30 2.7
AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein. 29 4.7
AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein. 29 4.7
AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein. 29 4.7
BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p pro... 29 6.2
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 29 6.2
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 29 6.2
BT010204-1|AAQ23522.1| 879|Drosophila melanogaster SD17974p pro... 29 8.1
AL023873-1|CAA19639.1| 777|Drosophila melanogaster EG:125H10.1 ... 29 8.1
AE014298-25|AAN09014.2| 879|Drosophila melanogaster CG3777-PC, ... 29 8.1
AE014298-24|AAN09013.2| 879|Drosophila melanogaster CG3777-PB, ... 29 8.1
AE014298-23|AAF45496.2| 879|Drosophila melanogaster CG3777-PA, ... 29 8.1
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 29 8.1
>AE014134-1505|AAO41167.1| 837|Drosophila melanogaster CG13388-PD,
isoform D protein.
Length = 837
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 570 STEHEIEVTTKDLEQTTSSIAKSNSATEVTSHTEISSLPIET 695
ST E V +L QT + + K+ + TSHT+ SS IET
Sbjct: 395 STVTETVVAAAELVQTQTILTKTTNTILPTSHTQASSEVIET 436
>AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +3
Query: 243 PSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGITT 422
P+VTSI TSTT K +TT S R T A + T + TT
Sbjct: 398 PTVTSISTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTT 457
Query: 423 DVP 431
P
Sbjct: 458 PKP 460
>AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +3
Query: 243 PSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGITT 422
P+VTSI TSTT K +TT S R T A + T + TT
Sbjct: 398 PTVTSISTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTT 457
Query: 423 DVP 431
P
Sbjct: 458 PKP 460
>AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +3
Query: 243 PSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGITT 422
P+VTSI TSTT K +TT S R T A + T + TT
Sbjct: 398 PTVTSISTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTT 457
Query: 423 DVP 431
P
Sbjct: 458 PKP 460
>BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p
protein.
Length = 1116
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 17 EEDTSLFDHNPAFPPIPDDLAVLSNHGR*NRTRAICRGRP 136
E+DT +NP FPP + +L G NR R RP
Sbjct: 634 EDDTFQGSNNPNFPPNYPNNTILRGSGSGNRCRDTSSNRP 673
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 29.1 bits (62), Expect = 6.2
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +3
Query: 222 IILTTEKPSVTSIETSTTAKQ-ESTTV------VEQLKESPMLNLRSAIPTEILNAPSLV 380
I TT KPS T+ +TST A E TT+ E+ E+P N S + + ++
Sbjct: 838 ITSTTPKPSTTTPKTSTVASSTEKTTISSPKPTTEKSTENPTTN--SVKTSALTSSTQRA 895
Query: 381 PADTGEP--LDDGITTDVP 431
+ T EP ITT P
Sbjct: 896 TSTTSEPTKTTQNITTTTP 914
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 29.1 bits (62), Expect = 6.2
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +3
Query: 222 IILTTEKPSVTSIETSTTAKQ-ESTTV------VEQLKESPMLNLRSAIPTEILNAPSLV 380
I TT KPS T+ +TST A E TT+ E+ E+P N S + + ++
Sbjct: 838 ITSTTPKPSTTTPKTSTVASSTEKTTISSPKPTTEKSTENPTTN--SVKTSALTSSTQRA 895
Query: 381 PADTGEP--LDDGITTDVP 431
+ T EP ITT P
Sbjct: 896 TSTTSEPTKTTQNITTTTP 914
>BT010204-1|AAQ23522.1| 879|Drosophila melanogaster SD17974p
protein.
Length = 879
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 TTEKPSVTS-IETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAP-SLVPADTGEPL 404
TT +PS S E A+ STT L+ P L LR T AP S A+ EP
Sbjct: 589 TTARPSEESPAEDDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPN 648
Query: 405 DDGITTDV 428
+ DV
Sbjct: 649 ATASSEDV 656
>AL023873-1|CAA19639.1| 777|Drosophila melanogaster EG:125H10.1
protein.
Length = 777
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 TTEKPSVTS-IETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAP-SLVPADTGEPL 404
TT +PS S E A+ STT L+ P L LR T AP S A+ EP
Sbjct: 487 TTARPSEESPAEDDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPN 546
Query: 405 DDGITTDV 428
+ DV
Sbjct: 547 ATASSEDV 554
>AE014298-25|AAN09014.2| 879|Drosophila melanogaster CG3777-PC,
isoform C protein.
Length = 879
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 TTEKPSVTS-IETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAP-SLVPADTGEPL 404
TT +PS S E A+ STT L+ P L LR T AP S A+ EP
Sbjct: 589 TTARPSEESPAEDDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPN 648
Query: 405 DDGITTDV 428
+ DV
Sbjct: 649 ATASSEDV 656
>AE014298-24|AAN09013.2| 879|Drosophila melanogaster CG3777-PB,
isoform B protein.
Length = 879
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 TTEKPSVTS-IETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAP-SLVPADTGEPL 404
TT +PS S E A+ STT L+ P L LR T AP S A+ EP
Sbjct: 589 TTARPSEESPAEDDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPN 648
Query: 405 DDGITTDV 428
+ DV
Sbjct: 649 ATASSEDV 656
>AE014298-23|AAF45496.2| 879|Drosophila melanogaster CG3777-PA,
isoform A protein.
Length = 879
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 TTEKPSVTS-IETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAP-SLVPADTGEPL 404
TT +PS S E A+ STT L+ P L LR T AP S A+ EP
Sbjct: 589 TTARPSEESPAEDDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPN 648
Query: 405 DDGITTDV 428
+ DV
Sbjct: 649 ATASSEDV 656
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 231 TTEKPSV-TSIETSTTAKQESTTVVEQLKESP 323
TTEKP T++E ST +E+TTV ++ P
Sbjct: 1471 TTEKPEDDTTVEDSTPIPEETTTVAQETTYDP 1502
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,028,138
Number of Sequences: 53049
Number of extensions: 512574
Number of successful extensions: 1860
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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