Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0710
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    24   4.7  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.2  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   8.2  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 194 LDCVAAKIDSMAVPTDARPQQAPALVFTQNSLI 96
           + C +A      +PTDARP  A   VFT  S++
Sbjct: 33  MGCSSAGSTGTTLPTDARPSFAS--VFTIESIL 63


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 83  YLIWKLVVNVCSMPMKFEY 27
           Y+I+ L+ N C+  +K+ Y
Sbjct: 275 YVIYDLIANECTPKLKYHY 293


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 559 MQCSL*YICVTFFFYLP 509
           ++CSL  +C  FF  LP
Sbjct: 272 VECSLIAVCARFFLQLP 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,192
Number of Sequences: 2352
Number of extensions: 14849
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)