Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0709
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.12 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.22 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   0.50 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   2.0  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    20   6.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    20   6.2  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    20   6.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    20   6.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    20   6.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 145 IYYGLLFFTPFILFT-NLIFFCSSEIILNVERF 50
           IYY   F++ FI+FT +L+F+C   I+L +  F
Sbjct: 212 IYY---FYSAFIIFTIHLLFYCVLIILLCIYYF 241



 Score = 25.4 bits (53), Expect = 0.17
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 127 FFTPFILFTNLIFFCSSEIILNV 59
           FF  FI+FT  + FC + I  N+
Sbjct: 169 FFCAFIIFTMHLLFCCAFIFFNM 191



 Score = 24.2 bits (50), Expect = 0.38
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 133 LLFFTPFILFTNLIFFCS 80
           LLF+ PFI+FT     C+
Sbjct: 83  LLFYCPFIIFTVHFLLCT 100



 Score = 22.2 bits (45), Expect = 1.5
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = -1

Query: 271 YFY---IIYNTNKFTWFKLIILYC--HGKNSLMLHT***YIKMLANSIYY-GLLFFTPFI 110
           YFY   II+  +   +  LIIL C  +   + +L T    + +     YY  LLF   FI
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273

Query: 109 LFTNLIFF 86
           +FT  + F
Sbjct: 274 IFTMHLLF 281



 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 142 YYGLLFFTPFILFTNLIFF 86
           YY  + FT  +LF   I++
Sbjct: 117 YYAFIIFTVHLLFLLCIYY 135


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 35  PEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           PE  R    I  DFTA++ D+  +   W E+
Sbjct: 170 PEGSRTPIEIPQDFTASDLDEEHRVAYWRED 200


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 0.50
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 23  KGKTPEEIRKTFNIKNDF 76
           K + PE ++K +NI+N+F
Sbjct: 48  KVQVPEALKKIYNIQNNF 65


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 325 LNDMKI*ILLKITMT*CTYFYIIYNTNKFTWF 230
           L +  I I++ +T+T   YF I  N++ F ++
Sbjct: 496 LAESPIFIIIPVTLTSVCYFMIGLNSHGFRFY 527


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 170 IHKDACK*HLLWFTF 126
           I K  CK  + WF F
Sbjct: 123 IFKSTCKMDITWFPF 137


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 170 IHKDACK*HLLWFTF 126
           I K  CK  + WF F
Sbjct: 123 IFKSTCKMDITWFPF 137


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 170 IHKDACK*HLLWFTF 126
           I K  CK  + WF F
Sbjct: 123 IFKSTCKMDITWFPF 137


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 170 IHKDACK*HLLWFTF 126
           I K  CK  + WF F
Sbjct: 123 IFKSTCKIDITWFPF 137


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 170 IHKDACK*HLLWFTF 126
           I K  CK  + WF F
Sbjct: 123 IFKSTCKMDITWFPF 137


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 133 LLFFTPFILFTNLIFFCSSEIILN 62
           L+F + FI     IF+ S+ +I N
Sbjct: 239 LMFTSHFIFIVVSIFYMSAYLISN 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,324
Number of Sequences: 336
Number of extensions: 1507
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)