Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0709
         (346 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   1.8  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    23   4.2  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    21   9.7  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    21   9.7  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
 Frame = -1

Query: 268 FYIIYNTNKFTWFKLIILYCHGKNSLMLH--------T***YIKMLANSIYYGLLFFTPF 113
           F I+YN  +F W   +I   H    L ++        T   YIK+  + +Y   ++F PF
Sbjct: 217 FSILYNLPRF-WEVTLISSTHPDTGLTIYCVKASDMRTNETYIKVYIHWLYMIFVYFLPF 275

Query: 112 --ILFTNLIFF 86
             I F NL+ +
Sbjct: 276 SLISFFNLMIY 286


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 287 NDMMYLFLYNLQHKQIYL 234
           N+  +LF+YN+ ++ ++L
Sbjct: 6   NEFHFLFMYNIYYRALWL 23


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 134 TIINAICKHLYVLSLCMQH*TIFPMAIKNN*FKP 235
           T+   I + + +LS+C    T+  +AI  N  KP
Sbjct: 155 TMYCKISQFVAILSICASVFTLMAIAIDMNPLKP 188


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 235 WFKLIILYCHGKNSLMLH 182
           + K II Y H  NSL+ H
Sbjct: 236 YHKQIIQYVHDLNSLVTH 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,869
Number of Sequences: 2352
Number of extensions: 5894
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)