Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0709
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 82 5e-16
U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein. 82 5e-16
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 82 5e-16
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 82 5e-16
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 82 5e-16
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 82 5e-16
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 58 6e-09
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 28 9.0
BC009035-1|AAH09035.1| 293|Homo sapiens Similar to brain-specif... 28 9.0
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 28 9.0
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 28 9.0
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 28 9.0
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 28 9.0
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 28 9.0
AL354919-7|CAM12879.1| 1500|Homo sapiens brain-specific angiogen... 28 9.0
AL354919-5|CAI16890.1| 1584|Homo sapiens brain-specific angiogen... 28 9.0
AL354919-3|CAM12875.1| 1554|Homo sapiens brain-specific angiogen... 28 9.0
AL354919-2|CAM12874.1| 1466|Homo sapiens brain-specific angiogen... 28 9.0
AL354919-1|CAM12876.1| 1499|Homo sapiens brain-specific angiogen... 28 9.0
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 28 9.0
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 28 9.0
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 28 9.0
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 28 9.0
AF227899-1|AAF36964.1| 873|Homo sapiens breast carcinoma-associ... 28 9.0
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 28 9.0
AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate... 28 9.0
AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homo... 28 9.0
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 28 9.0
AB065648-1|BAC05874.1| 1573|Homo sapiens seven transmembrane hel... 28 9.0
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 28 9.0
AB005298-1|BAA25362.1| 1572|Homo sapiens BAI 2 protein. 28 9.0
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein.
Length = 150
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 111 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 150
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
ANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +2
Query: 11 ANMIKGKTPEEIRKTFNIKNDFTAAEEDQV 100
ANMIKGKTPEEIRKTFNIKNDFT EE QV
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQV 153
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 777 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 805
>BC009035-1|AAH09035.1| 293|Homo sapiens Similar to brain-specific
angiogenesis inhibitor 2 protein.
Length = 293
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 143 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 174
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 777 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 805
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 691 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 719
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 691 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 719
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 775 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 803
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 582 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 610
>AL354919-7|CAM12879.1| 1500|Homo sapiens brain-specific angiogenesis
inhibitor 2 protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1350 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1381
>AL354919-5|CAI16890.1| 1584|Homo sapiens brain-specific angiogenesis
inhibitor 2 protein.
Length = 1584
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1435 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1466
>AL354919-3|CAM12875.1| 1554|Homo sapiens brain-specific angiogenesis
inhibitor 2 protein.
Length = 1554
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1423 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1454
>AL354919-2|CAM12874.1| 1466|Homo sapiens brain-specific angiogenesis
inhibitor 2 protein.
Length = 1466
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1335 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1366
>AL354919-1|CAM12876.1| 1499|Homo sapiens brain-specific angiogenesis
inhibitor 2 protein.
Length = 1499
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1368 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1399
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 691 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 719
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 691 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 719
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 775 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 803
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 582 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 610
>AF227899-1|AAF36964.1| 873|Homo sapiens breast
carcinoma-associated antigen isoform I protein.
Length = 873
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 338 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 366
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 691 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 719
>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
antigen BRCAA1 protein.
Length = 1213
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 696 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 724
>AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homolog
protein.
Length = 748
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 231 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 259
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 790 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 818
>AB065648-1|BAC05874.1| 1573|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1573
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1423 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1454
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 KTPEEIRKTFNIKNDFTAAEEDQVRKENE 115
K+PE +RK + ++ T EED+V K+ +
Sbjct: 458 KSPERLRKDIEVLSEDTDYEEDEVTKKRK 486
>AB005298-1|BAA25362.1| 1572|Homo sapiens BAI 2 protein.
Length = 1572
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 6 VPQT*SKERLLKKSVKRSTLRMISLLQKKIRF 101
VP+ + R + ++V ST++M SL +KK+R+
Sbjct: 1423 VPEPGERSRTMPRTVPGSTMKMGSLERKKLRY 1454
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,013,732
Number of Sequences: 237096
Number of extensions: 766946
Number of successful extensions: 1417
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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