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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0709
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81084-6|CAB03110.1|  176|Caenorhabditis elegans Hypothetical pr...    76   8e-15
Z81072-16|CAB03027.1|  176|Caenorhabditis elegans Hypothetical p...    76   8e-15
AF440505-1|AAL34093.1|  170|Caenorhabditis elegans SKR-1 protein.      76   8e-15
Z81084-3|CAB03108.1|  174|Caenorhabditis elegans Hypothetical pr...    69   7e-13
AF440506-1|AAL34094.1|  174|Caenorhabditis elegans SKR-2 protein.      69   7e-13
Z83109-7|CAB05516.1|  167|Caenorhabditis elegans Hypothetical pr...    60   6e-10
AF440507-1|AAL34095.1|  167|Caenorhabditis elegans SKR-3 protein.      60   6e-10
AL117207-10|CAB60402.1|  159|Caenorhabditis elegans Hypothetical...    45   1e-05
Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical pr...    34   0.024
AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.      34   0.024
Z50755-5|CAA90636.1|  173|Caenorhabditis elegans Hypothetical pr...    32   0.096
AF440519-1|AAL34107.1|  173|Caenorhabditis elegans SKR-20 protein.     32   0.096
AL023837-2|CAB63347.1|  199|Caenorhabditis elegans Hypothetical ...    31   0.17 
CU457737-5|CAM36326.1|  172|Caenorhabditis elegans Hypothetical ...    31   0.22 
AF440514-1|AAL34102.1|  172|Caenorhabditis elegans SKR-13 protein.     31   0.22 
U60980-1|AAB17536.1|  172|Caenorhabditis elegans protein ( Caeno...    30   0.51 
CU457737-3|CAM36324.1|  172|Caenorhabditis elegans Hypothetical ...    30   0.51 
AF440513-1|AAL34101.1|  172|Caenorhabditis elegans SKR-12 protein.     30   0.51 
U41991-2|AAA83342.2|  181|Caenorhabditis elegans Skp1 related (u...    29   0.68 
CU457737-6|CAM36327.1|  194|Caenorhabditis elegans Hypothetical ...    29   0.68 
AF440510-1|AAL34098.1|  194|Caenorhabditis elegans SKR-8 protein.      29   0.68 
AF440509-1|AAL34097.1|  194|Caenorhabditis elegans SKR-7 protein.      29   0.68 
AC024790-7|AAF60641.1|  194|Caenorhabditis elegans Skp1 related ...    29   0.68 
AF440515-1|AAL34103.1|  174|Caenorhabditis elegans SKR-14 protein.     28   1.6  
AC024790-6|AAF60635.1|  197|Caenorhabditis elegans Skp1 related ...    28   1.6  
AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine re...    28   2.1  
Z81047-13|CAB60284.1|  368|Caenorhabditis elegans Hypothetical p...    27   4.8  
CU457737-4|CAM36325.1|  194|Caenorhabditis elegans Hypothetical ...    26   6.3  
AL110479-12|CAB54358.1|  192|Caenorhabditis elegans Hypothetical...    26   6.3  
AF440512-1|AAL34100.1|  192|Caenorhabditis elegans SKR-10 protein.     26   6.3  
AF440511-1|AAL34099.1|  194|Caenorhabditis elegans SKR-9 protein.      26   6.3  
Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical pr...    26   8.3  
Z82072-2|CAB04921.1|  329|Caenorhabditis elegans Hypothetical pr...    26   8.3  
Z81029-8|CAB02702.1|  329|Caenorhabditis elegans Hypothetical pr...    26   8.3  
AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical...    26   8.3  
AF326787-1|AAK38268.1|  417|Caenorhabditis elegans CLN-3.3 protein.    26   8.3  
AF078788-5|AAC26960.2|  417|Caenorhabditis elegans Human cln (ne...    26   8.3  

>Z81084-6|CAB03110.1|  176|Caenorhabditis elegans Hypothetical
           protein F46A9.5 protein.
          Length = 176

 Score = 75.8 bits (178), Expect = 8e-15
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANMIKGK+PEEIR+TFNIKNDFT  EE+Q+RKEN WCE+
Sbjct: 138 ANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176


>Z81072-16|CAB03027.1|  176|Caenorhabditis elegans Hypothetical
           protein F46A9.5 protein.
          Length = 176

 Score = 75.8 bits (178), Expect = 8e-15
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANMIKGK+PEEIR+TFNIKNDFT  EE+Q+RKEN WCE+
Sbjct: 138 ANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176


>AF440505-1|AAL34093.1|  170|Caenorhabditis elegans SKR-1 protein.
          Length = 170

 Score = 75.8 bits (178), Expect = 8e-15
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANMIKGK+PEEIR+TFNIKNDFT  EE+Q+RKEN WCE+
Sbjct: 132 ANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 170


>Z81084-3|CAB03108.1|  174|Caenorhabditis elegans Hypothetical
           protein F46A9.4 protein.
          Length = 174

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC++
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174


>AF440506-1|AAL34094.1|  174|Caenorhabditis elegans SKR-2 protein.
          Length = 174

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANMIKGK+P+EIR+ FNIK+DFTA E +Q+RKEN WC++
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174


>Z83109-7|CAB05516.1|  167|Caenorhabditis elegans Hypothetical
           protein F44G3.6 protein.
          Length = 167

 Score = 59.7 bits (138), Expect = 6e-10
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANM+KGKTP +IR  FNI+NDF+  E + ++KEN WCE+
Sbjct: 129 ANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167


>AF440507-1|AAL34095.1|  167|Caenorhabditis elegans SKR-3 protein.
          Length = 167

 Score = 59.7 bits (138), Expect = 6e-10
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANM+KGKTP +IR  FNI+NDF+  E + ++KEN WCE+
Sbjct: 129 ANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167


>AL117207-10|CAB60402.1|  159|Caenorhabditis elegans Hypothetical
           protein Y60A3A.18 protein.
          Length = 159

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 127
           ANM+KGKTP ++R  F I N F+  E + ++K N WCE+
Sbjct: 122 ANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWCED 159


>Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical
           protein F47H4.10 protein.
          Length = 145

 Score = 34.3 bits (75), Expect = 0.024
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKND 73
           AN IKGK+PEEIR  FN+ N+
Sbjct: 121 ANSIKGKSPEEIRAVFNLGNE 141


>AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.024
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKND 73
           AN IKGK+PEEIR  FN+ N+
Sbjct: 120 ANSIKGKSPEEIRAVFNLGNE 140


>Z50755-5|CAA90636.1|  173|Caenorhabditis elegans Hypothetical
           protein R12H7.5 protein.
          Length = 173

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +2

Query: 8   AANMIKGKTPEEIRKTFNIKNDFTAAEE 91
           AA +I+GK+ EEIRK + I++D    EE
Sbjct: 127 AAELIRGKSTEEIRKIYGIRSDEEQMEE 154


>AF440519-1|AAL34107.1|  173|Caenorhabditis elegans SKR-20 protein.
          Length = 173

 Score = 32.3 bits (70), Expect = 0.096
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +2

Query: 8   AANMIKGKTPEEIRKTFNIKNDFTAAEE 91
           AA +I+GK+ EEIRK + I++D    EE
Sbjct: 127 AAELIRGKSTEEIRKIYGIRSDEEQMEE 154


>AL023837-2|CAB63347.1|  199|Caenorhabditis elegans Hypothetical
           protein Y37H2C.2 protein.
          Length = 199

 Score = 31.5 bits (68), Expect = 0.17
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEE 91
           ANM+K  TP +IR  F + N  ++AE+
Sbjct: 167 ANMMKNNTPSQIRARFGVSNKHSSAED 193


>CU457737-5|CAM36326.1|  172|Caenorhabditis elegans Hypothetical
           protein C52D10.8 protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 0.22
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 106
           +NM KGKT  E+R+ F I  D   A E+  +K
Sbjct: 135 SNMAKGKTTAELREIFGINTDEQDAAEETAQK 166


>AF440514-1|AAL34102.1|  172|Caenorhabditis elegans SKR-13 protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 0.22
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 106
           +NM KGKT  E+R+ F I  D   A E+  +K
Sbjct: 135 SNMAKGKTTAELREIFGINTDEQDAAEETAQK 166


>U60980-1|AAB17536.1|  172|Caenorhabditis elegans protein (
           Caenorhabditis elegansSkp1p homolog mRNA, complete cds.
           ).
          Length = 172

 Score = 29.9 bits (64), Expect = 0.51
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 106
           +NM KGKT  E+R+ F I  D   A E+  ++
Sbjct: 135 SNMAKGKTTAELREIFGINTDEQDAAEETAQR 166


>CU457737-3|CAM36324.1|  172|Caenorhabditis elegans Hypothetical
           protein C52D10.6 protein.
          Length = 172

 Score = 29.9 bits (64), Expect = 0.51
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 106
           +NM KGKT  E+R+ F I  D   A E+  ++
Sbjct: 135 SNMAKGKTTAELREIFGINTDEQDAAEETAQR 166


>AF440513-1|AAL34101.1|  172|Caenorhabditis elegans SKR-12 protein.
          Length = 172

 Score = 29.9 bits (64), Expect = 0.51
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRK 106
           +NM KGKT  E+R+ F I  D   A E+  ++
Sbjct: 135 SNMAKGKTTAELREIFGINTDEQDAAEETAQR 166


>U41991-2|AAA83342.2|  181|Caenorhabditis elegans Skp1 related
           (ubiquitin ligasecomplex component) protein 16 protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAE 88
           ANM KGK P ++R+ F I  D   AE
Sbjct: 145 ANMAKGKNPAQLRELFGILTDEEEAE 170


>CU457737-6|CAM36327.1|  194|Caenorhabditis elegans Hypothetical
           protein C52D10.9 protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           ANM  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 ANMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180


>AF440510-1|AAL34098.1|  194|Caenorhabditis elegans SKR-8 protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           ANM  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 ANMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180


>AF440509-1|AAL34097.1|  194|Caenorhabditis elegans SKR-7 protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           ANM  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 ANMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180


>AC024790-7|AAF60641.1|  194|Caenorhabditis elegans Skp1 related
           (ubiquitin ligasecomplex component) protein 7 protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           ANM  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 ANMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180


>AF440515-1|AAL34103.1|  174|Caenorhabditis elegans SKR-14 protein.
          Length = 174

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEE 91
           +NM KGKT  E+R+ F I  D   A E
Sbjct: 141 SNMAKGKTTAELREIFGINTDEQDAAE 167


>AC024790-6|AAF60635.1|  197|Caenorhabditis elegans Skp1 related
           (ubiquitin ligasecomplex component) protein 14 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEE 91
           +NM KGKT  E+R+ F I  D   A E
Sbjct: 164 SNMAKGKTTAELREIFGINTDEQDAAE 190


>AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein6 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 145 IYYGLLFFTPFILFTN--LIFFCSSEIILNVERFTDFFRSLSF 23
           + +G++FF    + T+  ++ FC+  + LN+   T FFR + F
Sbjct: 133 VIFGIIFFIWGFIETDDEIVIFCNPPLGLNITASTWFFRYILF 175


>Z81047-13|CAB60284.1|  368|Caenorhabditis elegans Hypothetical
           protein C41G6.15 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 292 ITMT*CTYFYIIYNTNKFTWFKLIILYCHGKNSLMLH 182
           IT+  C  F+ +Y+T KFT++++  L  +   S  L+
Sbjct: 166 ITLIICATFWTLYSTWKFTFYRVFWLPDNAVESCKLY 202


>CU457737-4|CAM36325.1|  194|Caenorhabditis elegans Hypothetical
           protein C52D10.7 protein.
          Length = 194

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           A M  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 AMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180


>AL110479-12|CAB54358.1|  192|Caenorhabditis elegans Hypothetical
           protein Y105C5B.13 protein.
          Length = 192

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           A M  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 139 AMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178


>AF440512-1|AAL34100.1|  192|Caenorhabditis elegans SKR-10 protein.
          Length = 192

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           A M  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 139 AMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178


>AF440511-1|AAL34099.1|  194|Caenorhabditis elegans SKR-9 protein.
          Length = 194

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 11  ANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 130
           A M  GK+P+E+R  F I  D      ++  KE    E+K
Sbjct: 141 AMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180


>Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 VNHNKCYLQASLCIITMYATLNYF 201
           V H++CY   +  I+ +Y T+ YF
Sbjct: 17  VGHHRCYFVVAESILMIYLTVLYF 40


>Z82072-2|CAB04921.1|  329|Caenorhabditis elegans Hypothetical
           protein W05H12.2 protein.
          Length = 329

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 265 YIIYNTNKFTWFKLIILYCHGKNSL 191
           Y IY T  F W K  I Y +GK+ L
Sbjct: 48  YPIYTTLDFNWNKENIFYLNGKDYL 72


>Z81029-8|CAB02702.1|  329|Caenorhabditis elegans Hypothetical
           protein W05H12.2 protein.
          Length = 329

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 265 YIIYNTNKFTWFKLIILYCHGKNSL 191
           Y IY T  F W K  I Y +GK+ L
Sbjct: 48  YPIYTTLDFNWNKENIFYLNGKDYL 72


>AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 VNHNKCYLQASLCIITMYATLNYF 201
           V H++CY   +  I+ +Y T+ YF
Sbjct: 17  VGHHRCYFVVAESILMIYLTVLYF 40


>AF326787-1|AAK38268.1|  417|Caenorhabditis elegans CLN-3.3 protein.
          Length = 417

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 133 LLFFTPFILFTNLIFFCSSEIILNVERFTDFFRSLSFDHVCG 8
           +L+  PF+  TN++FF    +   V +    F  + F+ + G
Sbjct: 320 MLYLLPFLQLTNMLFFFFDALYWFVPQIAIIFALIIFEGLFG 361


>AF078788-5|AAC26960.2|  417|Caenorhabditis elegans Human cln
           (neuronal ceroid lipofuscinosis)related protein 3.3
           protein.
          Length = 417

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 133 LLFFTPFILFTNLIFFCSSEIILNVERFTDFFRSLSFDHVCG 8
           +L+  PF+  TN++FF    +   V +    F  + F+ + G
Sbjct: 320 MLYLLPFLQLTNMLFFFFDALYWFVPQIAIIFALIIFEGLFG 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,813,553
Number of Sequences: 27780
Number of extensions: 130590
Number of successful extensions: 422
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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