Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0705
         (424 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3JX21 Cluster: Putative uncharacterized protein; n=1; ...    32   5.6  
UniRef50_Q1H0S2 Cluster: Kinase involved in biosynthesis of tetr...    31   9.7  
UniRef50_Q7QG96 Cluster: ENSANGP00000002770; n=2; Culicidae|Rep:...    31   9.7  
UniRef50_Q5CYF0 Cluster: Integral membrane protein with 10 trans...    31   9.7  

>UniRef50_A3JX21 Cluster: Putative uncharacterized protein; n=1;
           Sagittula stellata E-37|Rep: Putative uncharacterized
           protein - Sagittula stellata E-37
          Length = 515

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 6   GTGLINQTFSTKVLSIGASE 65
           GTGL NQTF+ ++LS GAS+
Sbjct: 84  GTGLANQTFARRMLSFGASD 103


>UniRef50_Q1H0S2 Cluster: Kinase involved in biosynthesis of
           tetrahydromethanopterin, Orf21; n=1; Methylobacillus
           flagellatus KT|Rep: Kinase involved in biosynthesis of
           tetrahydromethanopterin, Orf21 - Methylobacillus
           flagellatus (strain KT / ATCC 51484 / DSM 6875)
          Length = 209

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
 Frame = +2

Query: 167 MIEGTSPKIVTSRRRIKYVRSKWRVHEFEIW-STEMICRVVTLRM-----KDSVLVWLGS 328
           ++ G SP++VT+R  ++     W+ H   +W  +EMIC   ++ M      DS+  +L +
Sbjct: 72  LMTGLSPRLVTARSELEIAERGWQ-HRGIVWLPSEMICADESIPMNWGITSDSLAAYLAA 130

Query: 329 K 331
           K
Sbjct: 131 K 131


>UniRef50_Q7QG96 Cluster: ENSANGP00000002770; n=2; Culicidae|Rep:
           ENSANGP00000002770 - Anopheles gambiae str. PEST
          Length = 371

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 273 IISVLH-ISNSWTRHLLLTYLMRRLD 199
           +I V+H +SNSWTRH L   L+R L+
Sbjct: 141 LIGVVHDVSNSWTRHALSPVLLRVLE 166


>UniRef50_Q5CYF0 Cluster: Integral membrane protein with 10
           transmembrane domains; n=2; Cryptosporidium|Rep:
           Integral membrane protein with 10 transmembrane domains
           - Cryptosporidium parvum Iowa II
          Length = 541

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 304 ILHSQCHHSTYHFSA-PYLKLMDAPLTPYVFN 212
           +L S C H+TY+FS+  +LKL+ +P+    FN
Sbjct: 385 LLISGCFHATYNFSSLAFLKLVGSPIVHAYFN 416


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,425,490
Number of Sequences: 1657284
Number of extensions: 5362261
Number of successful extensions: 10484
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10483
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)