Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0699
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 154 8e-39
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 38 9e-04
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 35 0.011
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 35 0.011
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 34 0.014
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.033
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 32 0.058
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 32 0.076
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 31 0.13
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.31
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 30 0.31
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 29 0.41
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 29 0.54
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 29 0.54
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 27 2.9
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.0
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 5.0
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 25 6.6
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 25 6.6
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 8.8
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 8.8
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 8.8
SPAC10F6.15 |||S. pombe specific UPF0300 family protein 1|Schizo... 25 8.8
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 25 8.8
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 25 8.8
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 25 8.8
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 154 bits (374), Expect = 8e-39
Identities = 67/79 (84%), Positives = 78/79 (98%)
Frame = +1
Query: 208 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGG 387
M+KKVLLMG+SGSGK+SMRSI+F+NY+A+DTRRLGATID+EHSHVRFLGNLVLNLWDCGG
Sbjct: 1 MRKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGG 60
Query: 388 QEAFMENYFASQRDNIFRN 444
QEAFMENY ++QRD+IFRN
Sbjct: 61 QEAFMENYLSAQRDHIFRN 79
Score = 85.4 bits (202), Expect = 6e-18
Identities = 36/57 (63%), Positives = 49/57 (85%)
Frame = +2
Query: 446 VEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREEIF 616
V+VLIYVFDVESRE E+D+ +++CLEA + NSP+AR+FCL+HKMDLV E+ R+ +F
Sbjct: 80 VQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLIHKMDLVQEDLRDLVF 136
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 38.3 bits (85), Expect = 9e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
K++L+G G+GKT+ ++ + + + LG + H H F G + N+WD GQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNF-GEICFNVWDTAGQE 69
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.011
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 214 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 390
+K++LMG SGK+S++ ++F +T L +T + H+ + ++WD GQ
Sbjct: 4 RKIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTSKLTQDHISSF--IDFSVWDFPGQ 60
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 34.7 bits (76), Expect = 0.011
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +1
Query: 196 FFSKMK---KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL-GNLV 363
F SK K +K++++G +GKTS+ ++ Y + TI + H F+ GN +
Sbjct: 5 FGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYE---PTIFENYIHDIFVDGNSI 61
Query: 364 -LNLWDCGGQEAF 399
L+LWD GQE +
Sbjct: 62 ELSLWDTAGQEEY 74
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 34.3 bits (75), Expect = 0.014
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN---LVLNLWDCGG 387
KV+++G+SG GKTS+ + ++D + ATI + L + + L LWD G
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYK---ATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 388 QEAF 399
QE F
Sbjct: 67 QERF 70
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
FS + ++L++G +GKT++ + N +G ++ V + +++F N+W
Sbjct: 17 FSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKF------NVW 70
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + IF
Sbjct: 71 DVGGQDKIRPLWRHYFTGTKGLIF 94
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 32.3 bits (70), Expect = 0.058
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLN 369
+ F K + ++L++G +GKT++ + I +G ++ VE+ ++ F
Sbjct: 11 SLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISF------T 64
Query: 370 LWDCGGQE---AFMENYFASQRDNIF 438
+WD GGQ+ +YF + + IF
Sbjct: 65 VWDVGGQDKIRPLWRHYFQNTQGIIF 90
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 31.9 bits (69), Expect = 0.076
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
KV ++G S GKTS M + + ++ T+ LG + +R + ++WD GGQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNT-EITFSIWDLGGQR 70
Query: 394 AFM 402
F+
Sbjct: 71 EFV 73
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 31.1 bits (67), Expect = 0.13
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRR-LGATIDVEHSHVRFLGNLV-LNLWDCGGQ 390
KV+++G SG GKT + + +R+ + +GA D V LV L LWD GQ
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGA--DFLTKDVVVDDKLVTLQLWDTAGQ 67
Query: 391 EAF 399
E F
Sbjct: 68 ERF 70
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.9 bits (64), Expect = 0.31
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 464 VFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAE 595
+++++S E+ +DM + L ++ P R+FCLV + L E
Sbjct: 1144 IYNLDSMEIFQDMSLKEGPLSKVVWTRPMIRLFCLVWRCLLAKE 1187
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHV 342
K+ VLL+G +G GKT++ I+ A + ++ + A D E+ +
Sbjct: 1186 KEPVLLVGDTGCGKTTVCQIL-AECLHKELHIINAHQDTENGDI 1228
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.9 bits (64), Expect = 0.31
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +2
Query: 335 HMSVSSVIWFSTYGIVVVRKLSWKTILHHKETIYSGMVEVLIYVFDVESREMEKDMHYYQ 514
H+ V+++ W Y + +K I+ H + + +I+ V+++ K + YYQ
Sbjct: 592 HLDVANIAWLEAY--LTSQKNITCLIVSHDSSFLDHVCTDIIHYEGVKNQA--KKLGYYQ 647
Query: 515 SCLEAILQNSPEARIF 562
L A ++ PEA+ +
Sbjct: 648 GNLSAFVKVKPEAKSY 663
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 29.5 bits (63), Expect = 0.41
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 500 MHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREEI 613
+ Y+ SC E IL NS + R+F + K++ + + E I
Sbjct: 491 LKYWLSCYERILPNSADERVFLVRSKLESLLTRRAEII 528
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 29.1 bits (62), Expect = 0.54
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEH-SHVRFLGNLV--LN 369
FS K K++ +G+ GKTS+ + + + ATI ++ S +L + L
Sbjct: 7 FSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQ---ATIGIDFLSKTMYLEDRTVRLQ 63
Query: 370 LWDCGGQEAF 399
LWD GQE F
Sbjct: 64 LWDTAGQERF 73
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 29.1 bits (62), Expect = 0.54
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + FA+ ++ +D + G V L +WD GQE
Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 26.6 bits (56), Expect = 2.9
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + F+ + ID + + G + L +WD GQE
Sbjct: 11 KLLLIGDSGVGKSCLL-LRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 394 AF 399
F
Sbjct: 70 RF 71
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARD 297
++KV ++G SGSGK+++ ++ Y + D
Sbjct: 1128 REKVAIVGISGSGKSTLVELLRKTYPSED 1156
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 286 IARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDNI 435
+ RD+R+ + ID+ SHV LG VL + G + Q+D I
Sbjct: 491 LMRDSRKRPSAIDLLSSHVIRLGTAVLPPVEQGTFSKSARPSYGGQQDGI 540
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 461 YVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVH 574
YV E + KD HY +A+LQ C +H
Sbjct: 83 YVSSYEPSQKFKDGHYILEMQDAVLQRDDPEPDDCFIH 120
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 220 VLLMGKSGSGKTSMRSIIFANYIARDTRRL 309
V+++G SGSGK+++ + +F+ ++ RL
Sbjct: 35 VMVVGPSGSGKSTLINTLFSAHLMDSKGRL 64
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSII 273
+F M +V ++GK+G+GK+++ ++I
Sbjct: 410 SFGIDMDSRVAIVGKNGTGKSTLLNLI 436
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 214 KKVLLMGKSGSGKTSMRSII 273
K LMG+SG+GKT++ +++
Sbjct: 912 KLTALMGESGAGKTTLLNVL 931
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.0 bits (52), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 398 SWKTILHHKETIYSGMVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHK 577
S TI H KE G+ +D+ S + E D+H L+ L+N P + +HK
Sbjct: 1110 SASTIKHLKEQFNEGVD------YDLLSSDEEFDVHVIAGLLKLYLRNLPTNLLDTSMHK 1163
Query: 578 M 580
+
Sbjct: 1164 L 1164
>SPAC10F6.15 |||S. pombe specific UPF0300 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 512 GSNAYLFPFHDFLHQK 465
GSN Y FP H +L+ K
Sbjct: 293 GSNGYAFPIHLYLNMK 308
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 386 VRKLSWKTILHHKETIYSGMVEVLIYVFDVESREMEKDM 502
VR L KT +H IY G V+ ++VF +KD+
Sbjct: 835 VRSLMKKT-MHGSTNIYFGAVKATLHVFGYFKVNKQKDI 872
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 8.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 371 YGIVVVRKLSWKTILHHKET-IYSGMVEVLIYVFDVESREMEKDMHYYQSCLEAI 532
Y I + +SW HH + I +++ L+Y+F + DM Y + C+++I
Sbjct: 152 YDIYTLCLVSWH---HHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSI 203
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 500 YLFPFHDFLHQKHISELQPF 441
Y+FPF DF+ + SE Q F
Sbjct: 208 YIFPFEDFVRKYQTSEDQCF 227
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,655,765
Number of Sequences: 5004
Number of extensions: 58062
Number of successful extensions: 181
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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