Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0699
(617 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 36 0.026
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 36 0.026
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 35 0.059
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 34 0.10
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 33 0.14
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 33 0.18
01_06_0186 + 27294973-27295211,27295610-27296045 33 0.18
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 33 0.18
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 33 0.24
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 33 0.24
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 33 0.24
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 33 0.24
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 33 0.24
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 31 0.55
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 31 0.73
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 30 1.7
01_05_0531 - 22988663-22990282 30 1.7
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 30 1.7
06_03_0450 + 20913893-20913941,20914155-20914558 29 2.2
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 29 2.2
10_08_1041 + 22512528-22512539,22512603-22512793,22512870-225130... 29 3.9
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 29 3.9
06_03_1259 - 28800954-28802468 29 3.9
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 29 3.9
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 29 3.9
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 28 5.2
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 28 6.8
09_01_0149 + 2240183-2241133 28 6.8
04_04_1345 + 32792879-32794207 28 6.8
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 28 6.8
04_03_0097 + 11166422-11166529,11166647-11167277,11167385-11167533 28 6.8
11_06_0234 + 21574380-21575197,21576131-21576190,21578320-215800... 27 9.0
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 27 9.0
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 27 9.0
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 27 9.0
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 35.9 bits (79), Expect = 0.026
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMR-SIIFANYIARDTRRLGATIDVEHSHVRFL----GNLVLNLWDC 381
K+LL+G SG GK+S+ S + A A + TI V+ ++FL L L +WD
Sbjct: 21 KILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFK-IKFLTIGGKKLKLTIWDT 79
Query: 382 GGQEAF 399
GQE F
Sbjct: 80 AGQERF 85
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNL 372
+ F K + ++ L+G +GKTS+ ++I + D + T+ V GN+ + L
Sbjct: 13 SLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSED---MIPTVGFNMRKVT-KGNVTIKL 68
Query: 373 WDCGGQEAF 399
WD GGQ F
Sbjct: 69 WDLGGQPRF 77
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 34.7 bits (76), Expect = 0.059
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE- 393
++L++G SGKT++ ++ N DT + T+ +++ LN+WD GGQ+
Sbjct: 18 RILMVGLDNSGKTTI--VLKIN--GEDTGVISPTLGFNIKTIKY-HKYSLNIWDIGGQKT 72
Query: 394 --AFMENYFASQRDNIFRNG*SSDI 462
++ NYF Q D + SSDI
Sbjct: 73 IRSYWRNYF-EQTDGLVWVVDSSDI 96
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
FSK + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 196 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLW 375
FFS + +V+++G +GKT++ + + +G ++ V++ N+V +W
Sbjct: 12 FFSTREMRVVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVE----KVQYK-NVVFTVW 66
Query: 376 DCGGQE 393
D GGQE
Sbjct: 67 DVGGQE 72
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMR-SIIFANYIARDTRRLGATIDVEHSHVRFLG----NLVLNLWDC 381
K+LL+G S GK+S+ S + A++I + + TI V+ ++FL L L +WD
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDE---IAPTIGVDFK-IKFLTVNGKKLKLTIWDT 69
Query: 382 GGQEAF 399
GQE F
Sbjct: 70 AGQERF 75
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHS--HVRFLGNLV-LNLWDCGG 387
KV+L+G SG GK+++ S + + +TR +TI VE + VR LV +WD G
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETR---STIGVEFATKTVRVDDRLVKAQIWDTAG 77
Query: 388 QEAF 399
QE +
Sbjct: 78 QERY 81
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 205 KMKKKVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNL-VLNLWD 378
+M KV+++G SG GKTS M + + + +GA D V+ L L +WD
Sbjct: 6 RMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA--DFLTKEVQIDDRLFTLQIWD 63
Query: 379 CGGQEAF 399
GQE F
Sbjct: 64 TAGQERF 70
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +1
Query: 196 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLW 375
FF + +V+++G +GKT++ + + +G ++ V++ N+V +W
Sbjct: 12 FFGNKEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVE----KVQYK-NVVFTVW 66
Query: 376 DCGGQE 393
D GGQE
Sbjct: 67 DVGGQE 72
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 136 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 189
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 190 DVGGQDKIRPLWRHYFQNTQGLIF 213
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F+K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 196 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNL 372
FF + +V+++G +GKT++ + + +G ++ V++ +V F +
Sbjct: 12 FFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMF------TV 65
Query: 373 WDCGGQE 393
WD GGQE
Sbjct: 66 WDVGGQE 72
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F + KVL++G +GKT++ + + +G ++ VE+ +V F +W
Sbjct: 12 FCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAF------TVW 65
Query: 376 DCGGQE 393
D GGQ+
Sbjct: 66 DVGGQD 71
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + FA+ D+ +D + V G + L +WD GQE
Sbjct: 26 KLLLIGDSGVGKSCLL-LRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 84
Query: 394 AF 399
F
Sbjct: 85 RF 86
>01_05_0531 - 22988663-22990282
Length = 539
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 265 SIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYF 414
S++ + R + SHV F+GN ++N++ C G A +E F
Sbjct: 307 SVLSLLTLGRQVHARAVKSGLSRSHV-FVGNSLMNMYSCSGSTADLEKVF 355
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + FA+ D+ +D + V G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>06_03_0450 + 20913893-20913941,20914155-20914558
Length = 150
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 398 SWKTILHHKETIYSGMVEVLIYVFDVESREMEKDMHY 508
S+ T L HK YS VE LI DVE + EKD Y
Sbjct: 69 SFGTALKHKRQEYS--VEGLIASLDVEEKAQEKDAAY 103
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN---LVLNLWDCGG 387
K++L+G GKTS+ + + N + D + AT+ + R + + L++WD G
Sbjct: 16 KLVLLGDGRVGKTSL-VLRYVNDVFSDKQE--ATVQASYLTKRLVVEGVPITLSIWDTAG 72
Query: 388 QEAF 399
QE F
Sbjct: 73 QEKF 76
>10_08_1041 +
22512528-22512539,22512603-22512793,22512870-22513064,
22513661-22513779,22513923-22514099,22514257-22514360
Length = 265
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 LDDS*LLTRIQVNITLRVSKNQKQRFEPL--TYNIFFQNEEKGTINGKK 239
+DD+ LL R + + TLR N KQ F+ + + I+F +E++ +N KK
Sbjct: 33 VDDTSLLVRAKSDGTLRTLINVKQLFDRIKSSETIWFIDEDQLVVNLKK 81
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARD---TRRLGATIDVEHSHVRFLGNLVLN 369
FSK + V+++G +GKT++ + + Y+ + R+ T+ + + N+ L
Sbjct: 146 FSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIED-ANVKLV 204
Query: 370 LWDCGGQ 390
WD GGQ
Sbjct: 205 FWDLGGQ 211
>06_03_1259 - 28800954-28802468
Length = 504
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL 351
K+ LL G G+GKTS+ + I AN + D L T +SH+R L
Sbjct: 255 KRGYLLHGPPGTGKTSLVAAI-ANLLEFDVYDLELTTVPTNSHLRRL 300
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K + +G GKT M +N D + D ++V GN+V L LWD GQE
Sbjct: 9 KCVTVGDGAVGKTCMLICYTSNKFPTDY--IPTVFDNFSANVSVDGNIVNLGLWDTAGQE 66
Query: 394 AF 399
+
Sbjct: 67 DY 68
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFAN--YIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGG 387
K+LL+G SG GK+ + + FA+ Y+ +G +D + V G + L +WD G
Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDSYLESYISTIG--VDFKIRTVEQDGKTIKLQIWDTAG 66
Query: 388 QEAF 399
QE F
Sbjct: 67 QERF 70
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARD---TRRLGATIDVEHSHVRFLGNLVLN 369
F+K + VL++G +GKT++ I + Y+ + R+ T+ + + N L
Sbjct: 13 FNKTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIED-ANAKLV 71
Query: 370 LWDCGGQ 390
WD GGQ
Sbjct: 72 FWDLGGQ 78
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG-NLVLNLWDCGGQE 393
K + +G +G GK+ + + F + R+ L ++ V G N L +WD GQE
Sbjct: 10 KFVTIGDAGVGKSCLL-LQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQE 68
Query: 394 AF 399
AF
Sbjct: 69 AF 70
>09_01_0149 + 2240183-2241133
Length = 316
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 4 TEENYASCFNFIKEILII 57
T N++SCF F+KE L++
Sbjct: 5 TSANFSSCFTFLKEALVL 22
>04_04_1345 + 32792879-32794207
Length = 442
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 467 FDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKM 580
FD++SR + KD+H Y ++A+ ++ + F + +M
Sbjct: 201 FDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEM 238
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL 351
+ F K V ++G SGSGK+++ ++I Y + + L +D++ +R+L
Sbjct: 395 SLFFPAAKTVAVVGGSGSGKSTVVALIERFYDPNEGQVLLDNVDIKTLQLRWL 447
>04_03_0097 + 11166422-11166529,11166647-11167277,11167385-11167533
Length = 295
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 398 SWKTILHHKETIYSGMVEVLIYVFDVESREMEKD 499
S+ T L HK YS VE LI DVE + EKD
Sbjct: 121 SFGTALKHKRQEYS--VEGLIASLDVEEKAQEKD 152
>11_06_0234 +
21574380-21575197,21576131-21576190,21578320-21580053,
21581859-21582006
Length = 919
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 202 SKMKKKVLLMGKSGSGKTSMRSIIFAN 282
SKM K V ++G G GKT++ +F N
Sbjct: 186 SKMLKIVSVLGLGGLGKTTLAKFVFDN 212
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + F++ + ID + V G + L +WD GQE
Sbjct: 17 KLLLIGDSGVGKSCLL-LRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQE 75
Query: 394 AF 399
F
Sbjct: 76 RF 77
>02_05_0338 -
28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 398 SWKTILHHKETIYSGMVEVLIYVFDVESREMEKD 499
S+ T L HK YS VE LI DVE + EKD
Sbjct: 160 SFGTALKHKRQEYS--VEGLIASLDVEEKAREKD 191
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 205 KMKKKVLLMGKSGSGKTSM 261
K K +L+MG SGSGKTS+
Sbjct: 1405 KEKDHLLVMGPSGSGKTSL 1423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,825,196
Number of Sequences: 37544
Number of extensions: 320624
Number of successful extensions: 844
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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