Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0699
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 8e-25
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 33 0.19
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 32 0.32
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 31 0.57
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 31 0.75
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 31 0.99
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_37159| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13) 29 2.3
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 29 2.3
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 3.0
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 29 3.0
SB_59450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 28 5.3
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 27 9.2
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 27 9.2
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 27 9.2
>SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 110 bits (265), Expect = 8e-25
Identities = 49/57 (85%), Positives = 55/57 (96%)
Frame = +2
Query: 446 VEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREEIF 616
VEVLIYVFDVESRE+EKDMHYYQSCLEAILQNSP+A+IFCL+HKMDLV E+QR+ IF
Sbjct: 53 VEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLIHKMDLVQEDQRDMIF 109
Score = 67.7 bits (158), Expect = 7e-12
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = +1
Query: 259 MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDNIF 438
MRSIIFANYIARDTRRLGAT H + + QEAFMENYFASQRDNIF
Sbjct: 1 MRSIIFANYIARDTRRLGATNTFIH----------CSWFTYSRQEAFMENYFASQRDNIF 50
Query: 439 RN 444
R+
Sbjct: 51 RS 52
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ-- 390
++LL+G SGKT+ I + + D + T V+ G LN+WD GGQ
Sbjct: 19 RILLLGLDNSGKTT----ILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRK 74
Query: 391 -EAFMENYF 414
+ +NYF
Sbjct: 75 IRPYWKNYF 83
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNL 372
+ F K + ++ L+G SGKT+ ++I + + D + T+ V GN+ + +
Sbjct: 14 SLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSED---MIPTVGFNMRKVS-KGNVTIKV 69
Query: 373 WDCGGQEAF 399
WD GGQ F
Sbjct: 70 WDIGGQPRF 78
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 190 TTFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVL 366
T F K + ++L++G +GKT++ + I +G ++ VE+ ++ F
Sbjct: 10 TRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISF------ 63
Query: 367 NLWDCGGQE 393
+WD GGQ+
Sbjct: 64 TVWDVGGQD 72
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL--GNLVLNLWDCG 384
+K++L++G GSGK S+ + D+ + +T E +V L L LN+W+ G
Sbjct: 166 EKRILVLGLDGSGK----SVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIG 221
Query: 385 GQE---AFMENYFA 417
G E A+ N+ A
Sbjct: 222 GDEKYRAYWPNFIA 235
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL---GNLV-LNLWDCG 384
K+L++G+SG GK+S+ + D +GATI V+ V+ L GN L +WD
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPD---IGATIGVDFK-VKTLTVEGNKAKLAIWDTA 65
Query: 385 GQEAF 399
GQE F
Sbjct: 66 GQERF 70
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 31.9 bits (69), Expect = 0.43
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 205 KMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDC 381
K KVL++G G GKTS+ Y D +DV + G+ V L WD
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFC-DNSSSTVGVDVGTRVLDIHGDRVKLQCWDT 67
Query: 382 GGQEAF 399
GQE F
Sbjct: 68 AGQEKF 73
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+S+ + FA+ +T +D + + G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKSSLL-LRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSM-RSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
+++L+G S GK+S+ R + +G V ++ + L +WD GQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 394 AFMENYFASQRDNI 435
F ++ R+ +
Sbjct: 75 RFRSITYSYYRNTV 88
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRF-LGNLVLNLWDCGGQE 393
KV+L+G++G GKTS+ + N+ RR ID V+ + L++WD G E
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFT-PGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVE 71
Query: 394 AF---MENYF 414
F +NY+
Sbjct: 72 RFRTVTKNYY 81
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 269 SYSPII*QGIQDASEQQLTLN--IHMSVSSVIWFSTYGIVVVRKLSWKTILHHKETIYSG 442
SY+ +I Q IQ + E++LTL+ V+SV +F G WK + H +++S
Sbjct: 68 SYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKG-DSNSSAGWKNSIRHNLSLHSK 126
Query: 443 MVEV 454
V V
Sbjct: 127 FVRV 130
>SB_37159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 446 VEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKM 580
V L + D K+ +YY+SCLEAI ++ + + L+ K+
Sbjct: 139 VSSLEILVDAAKFSSHKEANYYESCLEAIREHVHDGNVRTLLQKL 183
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 30.7 bits (66), Expect = 0.99
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMR-SIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQ 390
K++++G S GKT + + + R +G +D + G V L LWD GQ
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIG--VDFWEKSLELNGEFVKLQLWDTAGQ 105
Query: 391 EAFMENYFASQRDNI 435
E F ++ N+
Sbjct: 106 ERFRKSMVCHYYRNV 120
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGN-LVLNLWDCGGQ 390
K++L+G+ GKT+ M ++ N ++ G +++ FL + +WD GGQ
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGGQ 612
Query: 391 EAF 399
E +
Sbjct: 613 EDY 615
>SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13)
Length = 829
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +1
Query: 163 KNKDLNP*PTTFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRR-----LGATIDV 327
+ KDL+ ++ K V L G SG GKT++ ++ + + R L D+
Sbjct: 100 REKDLDGLNKLLGNRFIKAVNLFGASGVGKTTLAQVVAKGFCQTNGFRHLCVDLRDITDI 159
Query: 328 EHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDN 432
+ H + L L WD Q + ++ + +DN
Sbjct: 160 SNVHFQLLQAFGLTCWDKDIQRLY--SHLNASKDN 192
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQ 390
KV+ +G SG GK+S + + T +G ++ +V G + + LWD GQ
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVN--GQCIAIQLWDTAGQ 955
Query: 391 EAF 399
E F
Sbjct: 956 ERF 958
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 223 LLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVE-HSHVRFL--GNLVLNLWDCGGQE 393
L +G G+GKT+ + + ++ AT+ VE H + F G + N+WD GQE
Sbjct: 36 LQVGDGGTGKTTF---VKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQE 92
Query: 394 AF 399
F
Sbjct: 93 KF 94
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 470 DVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREE 610
D++ RE +K H Q E +Q E R HK D E R+E
Sbjct: 97 DLQERERQKLEHAQQRKRELEIQAEQETRHLLAAHKQDRGIEPHRDE 143
>SB_59450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 226 LMGKS-GSGKTSMRSIIFANYIARDTRRLGAT 318
L G+S G G+TS +S +F N +A T GAT
Sbjct: 35 LFGQSTGFGQTSQQSSLFGNKLATSTTGFGAT 66
>SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1297
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 226 LMGKS-GSGKTSMRSIIFANYIARDTRRLGAT 318
L G+S G G+TS +S +F N +A T GAT
Sbjct: 405 LFGQSTGFGQTSQQSSLFGNKLATSTTGFGAT 436
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 378
F + +++++G +GKT+ I ++T TI ++ N+ L +WD
Sbjct: 15 FGNRQVRIVMLGLDAAGKTT----ILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWD 70
Query: 379 CGGQE 393
GGQ+
Sbjct: 71 VGGQD 75
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 214 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV 363
KKV ++G SGSGK+++ ++F + + R L A D+ + L +V
Sbjct: 438 KKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLVAGQDIRDFSLESLRKVV 487
>SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 554 WLLESSVKSPQDKTGSNAYLFPF 486
WLL+++ P +KTGS ++F F
Sbjct: 114 WLLQANKGHPSNKTGSGCHVFGF 136
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 379 CGGQEAFMENYFASQRDNIFRN 444
C G A + Y+ +RDNIFR+
Sbjct: 582 CNGAPADSDTYYQKKRDNIFRH 603
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 280 NYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDN 432
N I +DT + ++E + +R GNL+LN D ++ +E Y +++ N
Sbjct: 148 NVILQDTLKKNFASELESARLRICGNLLLNN-DEFSKDEILEKYKEAEKLN 197
>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
Length = 1235
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -1
Query: 440 LNILSLCDAK*FSMKAS*PPQSHKLRTKLPRKRTCE--CSTSIVAPRRL 300
+N+L LC + F AS PP ++ + + +TC+ C + ++A +++
Sbjct: 28 INLLRLCTPEHFLCDASIPPPRMEVTFSMQKLKTCDERCRSYLMAVQKV 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,961,833
Number of Sequences: 59808
Number of extensions: 403908
Number of successful extensions: 860
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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