Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0699
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 140 7e-34
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 38 0.008
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 35 0.054
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 35 0.054
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 34 0.071
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 33 0.16
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.29
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 32 0.29
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 32 0.38
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 32 0.38
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 31 0.50
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 31 0.66
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 31 0.66
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.87
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 31 0.87
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 30 1.2
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 30 1.2
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 30 1.2
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 30 1.2
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 30 1.5
Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical pr... 29 2.0
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 2.0
AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical ... 29 2.0
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 28 4.6
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 28 4.6
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 28 4.6
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 28 4.6
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 28 4.6
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 28 4.6
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 28 6.1
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 140 bits (339), Expect = 7e-34
Identities = 62/78 (79%), Positives = 72/78 (92%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 390
K+KVLLMGKSGSGKTSMRSIIFANYIARD RLG TI+VEH+HV+FLGN+VL+LWDCGGQ
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQ 63
Query: 391 EAFMENYFASQRDNIFRN 444
E+FMEN+ SQ+D IF+N
Sbjct: 64 ESFMENFLVSQKDQIFKN 81
Score = 103 bits (247), Expect = 1e-22
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +2
Query: 410 ILHHKETIYSGMVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLV 589
++ K+ I+ V+VLIYVFDVESRE EKD+ YYQSCLEA+LQNSP A++FCL+HKMDL+
Sbjct: 71 LVSQKDQIFKN-VQVLIYVFDVESREFEKDLRYYQSCLEALLQNSPNAQVFCLIHKMDLI 129
Query: 590 AEEQREEIF 616
E++REE F
Sbjct: 130 EEDKREETF 138
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +2
Query: 425 ETIYSGMVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQR 604
ET V+ +++ FD +M D +YQ L+ +L++SPEA+IF + K DL++ ++
Sbjct: 329 ETTTFSNVDAMLFFFDASVDDMSADFDHYQKALKLLLKHSPEAKIFIFLTKTDLLSVDED 388
Query: 605 EEI 613
+ I
Sbjct: 389 KVI 391
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +1
Query: 214 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
+K++L+G++G+GK+S+R F + R L T D+ HS +R+ G + L + D GG +
Sbjct: 263 RKIILLGRTGAGKSSLRGAQF--HDRRQFDNLAPTGDITHSSLRYAG-IYLKMQDYGGTK 319
Query: 394 AFMEN 408
+EN
Sbjct: 320 EEIEN 324
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 196 FFSKMKKKVLLMGKSGSGKTSM----RSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV 363
FF K V+++G +GKT+ +S +Y + ++ AT+ + +V L N
Sbjct: 12 FFKKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLNTGNVE-LNNTC 70
Query: 364 LNLWDCGGQEAFME 405
L+ WD GGQE+ E
Sbjct: 71 LHFWDLGGQESLRE 84
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG--NLVLNLWDCGGQ 390
KV+++G+SG+GKT++ + N D ID +H V+ ++ L LWD GQ
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTT-IGIDFKHKIVQLNDGQSIRLQLWDTAGQ 66
Query: 391 EAFME 405
E F +
Sbjct: 67 ERFRQ 71
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEA 396
++LL+G +GKT+ I + D + + T V +G++ LN+WD GGQ +
Sbjct: 19 RILLLGLDNAGKTT----ILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRS 74
Query: 397 FMENYFASQRDNI 435
+ Y+++ +NI
Sbjct: 75 -IRPYWSNYYENI 86
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 211 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 390
K K++++G +GKT+ I NY+ +D TI V + NL +WD GGQ
Sbjct: 17 KYKIIVVGLDNAGKTT----ILYNYVTKDQVETKPTIGSNVEEVSYR-NLDFVIWDIGGQ 71
Query: 391 EAFMENY 411
E+ +++
Sbjct: 72 ESLRKSW 78
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE- 393
++L++G +GKT++ ++ T + T+ + V F + LNLWD GGQ+
Sbjct: 18 RILILGLDNAGKTTLMK----KFLDEPTDTIEPTLGFDIKTVHFK-DFQLNLWDVGGQKS 72
Query: 394 --AFMENYFAS 420
++ +NYF S
Sbjct: 73 LRSYWKNYFES 83
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNL 372
+ F K + ++ L+G SGKT+ ++I + D + T+ + GN+ + L
Sbjct: 14 SLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTED---MIPTVGFNMRKIT-KGNVTIKL 69
Query: 373 WDCGGQEAF 399
WD GGQ F
Sbjct: 70 WDIGGQPRF 78
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNL 372
+ F K + ++ L+G SGKT+ ++I + D + T+ + GN+ + L
Sbjct: 14 SLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTED---MIPTVGFNMRKIT-KGNVTIKL 69
Query: 373 WDCGGQEAF 399
WD GGQ F
Sbjct: 70 WDIGGQPRF 78
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+L++G+SG GK+S+ + F + + + +D + + GN V L +WD GQE
Sbjct: 13 KILIIGESGVGKSSL-MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 394 AF 399
F
Sbjct: 72 RF 73
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical
protein F16D3.4 protein.
Length = 1232
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 335 HMSVSSVIWFSTYGIVVVRKLSWKTILHHKETIYSGMVEVLIYVFDVESREMEKDMHYYQ 514
H+ V V +STY +++R L K ++H E I L + ++ + D YY
Sbjct: 633 HLCVP-VAEYSTYSAIILRHLITKKVVHWDEKIREQAAISLEKISEIRLENVSDD--YYM 689
Query: 515 SCLEAILQNSPEARI 559
L+ L+ S E RI
Sbjct: 690 EILDDFLKASCETRI 704
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.22
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +1
Query: 190 TTFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEH------SHVRFL 351
T+ K K KV+++G SG GKTS II+ + R + ATI + R
Sbjct: 45 TSTAPKHKAKVVVLGDSGVGKTS---IIYRHRYGAHYRPVNATIGASFVSFDVGADYRDR 101
Query: 352 GNLV-LNLWDCGGQEAF 399
++V L +WD GQE F
Sbjct: 102 EDVVRLQVWDTAGQERF 118
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
K++L+G G+GKT+ ++ + + + LG + H G + N+WD GQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGQIRFNVWDTAGQE 69
Query: 394 AF 399
F
Sbjct: 70 KF 71
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F K + ++L++G +GKT++ + I +G ++ VE+ ++ F +W
Sbjct: 13 FGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVW 66
Query: 376 DCGGQE---AFMENYFASQRDNIF 438
D GGQ+ +YF + + IF
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIF 90
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 199 FSKMKKKVLLM-GKSGSGKTSMRSIIFANYIARDTRRLGATIDVE 330
FS++K K+L++ GK G GK+++ S + A +A D + A +DV+
Sbjct: 54 FSRIKHKILILSGKGGVGKSTLTSNL-ARALASDPSKQVAILDVD 97
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQE 393
KV+++G SG GKTS M + + + +GA ++ + L +WD GQE
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDR-TVTLQIWDTAGQE 69
Query: 394 AF 399
F
Sbjct: 70 RF 71
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.50
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL--GNLV-LNLWDCGG 387
K++L+G G GKT + F N D R G TI V+ + + G V L +WD GG
Sbjct: 12 KIVLVGDMGVGKTCVVQR-FRNGTFVD--RQGTTIGVDFTMKTLVVDGKRVKLQIWDTGG 68
Query: 388 QEAF 399
QE F
Sbjct: 69 QERF 72
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANY 285
TF K +KV ++G++GSGK+S+ ++IF Y
Sbjct: 1138 TFEIKGGEKVGIIGRTGSGKSSLANLIFRLY 1168
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANY 285
TF K +KV ++G++GSGK+S+ ++IF Y
Sbjct: 1111 TFEIKGGEKVGIIGRTGSGKSSLANLIFRLY 1141
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATID-VEHSHVRFLGNLVLNLW 375
F + ++L++G G+GKT++ + + +G ++ VE+ +++F +W
Sbjct: 12 FGAREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKF------QVW 65
Query: 376 DCGGQ 390
D GGQ
Sbjct: 66 DLGGQ 70
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANY 285
TF K +KV ++G++GSGK+S+ ++IF Y
Sbjct: 1138 TFEIKGGEKVGIIGRTGSGKSSLANLIFRLY 1168
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANY 285
TF K +KV ++G++GSGK+S+ ++IF Y
Sbjct: 1111 TFEIKGGEKVGIIGRTGSGKSSLANLIFRLY 1141
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 193 TFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDV---EHSHVRFLGNLV 363
T+ K KV+++G + GKT + F R ATI V E S V L
Sbjct: 94 TYKQKRTFKVIIVGNAAVGKTCLS---FRFCCGRFPEHTEATIGVDFRERSCVIENELLR 150
Query: 364 LNLWDCGGQEAFMENYFASQRDNI 435
+ LWD GQE + ++ A N+
Sbjct: 151 VQLWDTAGQERYRQSIVAHYYRNV 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 30.7 bits (66), Expect = 0.87
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 378
F ++ + L++G G+GKT++ + N +G ++ V F + L +WD
Sbjct: 13 FPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVET----VTFQ-KITLTVWD 67
Query: 379 CGGQE---AFMENYFASQRDNIF 438
GGQ+ A + YF + +F
Sbjct: 68 VGGQKKIRALWKYYFPNTTTLVF 90
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GKT + F++ T ID + + G + L +WD GQE
Sbjct: 11 KLLLIGDSGVGKTCIL-YRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 394 AF 399
F
Sbjct: 70 RF 71
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GKT + F++ T ID + + G + L +WD GQE
Sbjct: 11 KLLLIGDSGVGKTCIL-YRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 394 AF 399
F
Sbjct: 70 RF 71
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 199 FSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 378
F K + ++L++G +GKT+ I++ + + + T+ V + N+ N+WD
Sbjct: 9 FGKKELRILMLGLDAAGKTT---ILYKLKLGQSVTTI-PTVGFNVETVTYK-NIKFNVWD 63
Query: 379 CGGQE 393
GGQ+
Sbjct: 64 VGGQD 68
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+L++G SG GK+S+ + FA+ + +D + + G V L +WD GQE
Sbjct: 12 KLLIIGDSGVGKSSLL-LRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQE 70
Query: 394 AF 399
F
Sbjct: 71 RF 72
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GK+ + + FA+ ++ +D + + G + L +WD GQE
Sbjct: 13 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 394 AF 399
F
Sbjct: 72 RF 73
>Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 220 VLLMGKSGSGKTSMRSIIFANYIARDTRRLGAT 318
V+LMG SGKTS+R ++F +T + +T
Sbjct: 29 VILMGHKRSGKTSIRKVVFQKMSPNETMFVEST 61
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG----NLVLNLWDCG 384
++++ G + GK+S + T +L +T+ V+ HV+ + N+ L LWD
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQF---TNQLPSTLGVDF-HVKTVNVDGRNVALQLWDTA 518
Query: 385 GQEAF 399
GQE F
Sbjct: 519 GQERF 523
>AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 220 VLLMGKSGSGKTSMRSIIFANYIARDTRRLGAT 318
V+LMG SGKTS+R ++F +T + +T
Sbjct: 29 VILMGHKRSGKTSIRKVVFQKMSPNETMFVEST 61
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 278 PII*QGIQDASEQQLTLNIHMSVSSVIWFSTYGIVVVRKLSWKTILHHKETIYSGMVEVL 457
P QGI SE +LT+ +++ S ++W + +++V K Y+ +V L
Sbjct: 46 PTFFQGILKISELKLTILLYL--SIIVWLTIASMILVTLTFLKKFCTSTAANYNMIVMFL 103
Query: 458 IYVFDV 475
+VF+V
Sbjct: 104 NFVFNV 109
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 205 KMKKKVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDC 381
K+ KVL++G G GKTS +R + + + +G ++ V + L +WD
Sbjct: 9 KISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDI 68
Query: 382 GGQEAF 399
GQ+ +
Sbjct: 69 SGQDRY 74
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GKT + F++ ++ ID + + G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKTCVL-FRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 205 KMKKKVLLMGKSGSGKTS-MRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDC 381
K+ KVL++G G GKTS +R + + + +G ++ V + L +WD
Sbjct: 9 KISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDI 68
Query: 382 GGQEAF 399
GQ+ +
Sbjct: 69 SGQDRY 74
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSM-RSIIFANYIARDTRRLGATIDVEHSHVRFLGN--LVLNLWDCGG 387
KV+L+G +G GKT + R + + +G ++ V GN + L +WD G
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV---GNDKIKLQIWDTAG 65
Query: 388 QEAF 399
QE F
Sbjct: 66 QERF 69
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GKT + F++ ++ ID + + G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKTCVL-FRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 217 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQE 393
K+LL+G SG GKT + F++ ++ ID + + G + L +WD GQE
Sbjct: 10 KLLLIGDSGVGKTCVL-FRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 394 AF 399
F
Sbjct: 69 RF 70
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 196 FFSKMKK-KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEH-SHVRFLGNLV-- 363
F + +KK K++ +G+ GKTS+ I Y + D ATI ++ S +L +
Sbjct: 4 FGNPLKKFKLVFLGEQSVGKTSL--ITRFMYDSFDNT-YQATIGIDFLSKTMYLEDRTVR 60
Query: 364 LNLWDCGGQEAF 399
L LWD GQE F
Sbjct: 61 LQLWDTAGQERF 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,561,931
Number of Sequences: 27780
Number of extensions: 319652
Number of successful extensions: 831
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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