Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0686
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 169 6e-42
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 169 6e-42
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 169 6e-42
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 169 6e-42
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 169 6e-42
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 169 6e-42
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 145 9e-35
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 127 3e-29
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 63 6e-10
BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.3
BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein. 32 1.3
BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.3
AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia... 32 1.3
AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia... 32 1.3
AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein. 32 1.3
AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein. 32 1.3
AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein. 31 3.1
BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein. 31 4.1
BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2 (Drosoph... 31 4.1
AK131519-1|BAD18661.1| 337|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix t... 31 4.1
AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellula... 31 4.1
AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein. 31 4.1
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 169 bits (411), Expect = 6e-42
Identities = 83/135 (61%), Positives = 94/135 (69%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR LP+ P + +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 12 VVGRCLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE
Sbjct: 71 SPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130
Query: 363 VIKAAACRRPQVKQF 407
I A+ CRRP VKQF
Sbjct: 131 EIAASKCRRPAVKQF 145
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 137 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 145 bits (352), Expect = 9e-35
Identities = 72/125 (57%), Positives = 84/125 (67%)
Frame = +3
Query: 3 VIGRKLPSXXTSPNLPCIK*EFSLRXPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXX 182
V+GR+LP+ P + +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 12 VVGRRLPTPKCHTP-PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEK 70
Query: 183 XXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 362
NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+ VE
Sbjct: 71 SPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMMVE 130
Query: 363 VIKAA 377
I A+
Sbjct: 131 EIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 127 bits (306), Expect = 3e-29
Identities = 56/69 (81%), Positives = 60/69 (86%)
Frame = +3
Query: 201 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 380
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 381 CRRPQVKQF 407
CRRP VKQF
Sbjct: 101 CRRPAVKQF 109
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 101 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 63.3 bits (147), Expect = 6e-10
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +3
Query: 303 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 407
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 35
Score = 32.7 bits (71), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 377 CVSPSTGQTVPNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 499
C P+ Q +S I+FPLP RV + F KRP+T+F
Sbjct: 27 CRRPAVKQ-FHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 66
>BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 535 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 594
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 595 CCNWDAKKGEYVFPAKKK 612
>BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein.
Length = 601
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 133 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 192
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 193 CCNWDAKKGEYVFPAKKK 210
>BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 535 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 594
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 595 CCNWDAKKGEYVFPAKKK 612
>AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 947
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 479 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 538
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 539 CCNWDAKKGEYVFPAKKK 556
>AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 535 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 594
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 595 CCNWDAKKGEYVFPAKKK 612
>AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein.
Length = 925
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 560 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 619
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 620 CCNWDAKKGEYVFPAKKK 637
>AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein.
Length = 1032
Score = 32.3 bits (70), Expect = 1.3
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 357 VEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIKP 536
VE IK P+ APS+S +C R +PS L S + + IKP
Sbjct: 564 VEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKP 623
Query: 537 M*KWN--KVSFYIPQKKK 584
W+ K + P KKK
Sbjct: 624 CCNWDAKKGEYVFPAKKK 641
>AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein.
Length = 1525
Score = 31.1 bits (67), Expect = 3.1
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 282 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFPTAPSDS--HCPNVCTTT 455
G TQC MG H R H++ +V+ + + Q APS S HCP CT +
Sbjct: 231 GLYTQC---MGPSH-LRGHNVA--EVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCS 284
Query: 456 RDLIPSRTRGL 488
+++ R +GL
Sbjct: 285 NNIVDCRGKGL 295
>BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein.
Length = 517
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 303 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNV-----CTTTRDLI 467
+D+ A HR+ A+ ++ K+ + +CRRP P AP +H V C L
Sbjct: 288 KDLAAIHRSMANPEELDKLISDRPESCRRPGKPGEPEAPVLTHATTVAVAHGCLAVSQLP 347
Query: 468 PSRTRGLALTS 500
P L+L S
Sbjct: 348 PQPLMTLSLQS 358
>BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2
(Drosophila) protein.
Length = 1529
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 282 GAVTQCYRDMGARHRARAHSI-QIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTR 458
G TQC MG H R H++ ++ K E + C Q P+ S HCP CT +
Sbjct: 231 GLYTQC---MGPSH-LRGHNVAEVQKREFV----CSGHQSFMAPSC-SVLHCPAACTCSN 281
Query: 459 DLIPSRTRGL 488
+++ R +GL
Sbjct: 282 NIVDCRGKGL 291
>AK131519-1|BAD18661.1| 337|Homo sapiens protein ( Homo sapiens
cDNA FLJ16748 fis, clone FCBBF3010361, moderately
similar to Danio rerio mRNA for winged helix nude. ).
Length = 337
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 303 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNV-----CTTTRDLI 467
+D+ A HR+ A+ ++ K+ + +CRRP P AP +H V C L
Sbjct: 108 KDLAAIHRSMANPEELDKLISDRPESCRRPGKPGEPEAPVLTHATTVAVAHGCLAVSQLP 167
Query: 468 PSRTRGLALTS 500
P L+L S
Sbjct: 168 PQPLMTLSLQS 178
>AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix
transcription factor FOXN4 protein.
Length = 448
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 303 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNV-----CTTTRDLI 467
+D+ A HR+ A+ ++ K+ + +CRRP P AP +H V C L
Sbjct: 248 KDLAAIHRSMANPEELDKLISDRPESCRRPGKPGEPEAPVLTHATTVAVAHGCLAVSQLP 307
Query: 468 PSRTRGLALTS 500
P L+L S
Sbjct: 308 PQPLMTLSLQS 318
>AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellular
slit protein Slit2 protein.
Length = 1521
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 282 GAVTQCYRDMGARHRARAHSI-QIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTR 458
G TQC MG H R H++ ++ K E + C Q P+ S HCP CT +
Sbjct: 231 GLYTQC---MGPSH-LRGHNVAEVQKREFV----CSGHQSFMAPSC-SVLHCPAACTCSN 281
Query: 459 DLIPSRTRGL 488
+++ R +GL
Sbjct: 282 NIVDCRGKGL 291
>AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein.
Length = 1529
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 282 GAVTQCYRDMGARHRARAHSI-QIIKVEVIKAAACRRPQVKQFPTAPSDSHCPNVCTTTR 458
G TQC MG H R H++ ++ K E + C Q P+ S HCP CT +
Sbjct: 231 GLYTQC---MGPSH-LRGHNVAEVQKREFV----CSGHQSFMAPSC-SVLHCPAACTCSN 281
Query: 459 DLIPSRTRGL 488
+++ R +GL
Sbjct: 282 NIVDCRGKGL 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,208,188
Number of Sequences: 237096
Number of extensions: 1719234
Number of successful extensions: 3564
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3557
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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