Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0675
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.9  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 13  DHPDHRPPLPLRQDQDTGGPENS 81
           D P   PP P  +D D+  P+N+
Sbjct: 208 DVPSTIPPPPPEEDDDSNIPQNN 230


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 10  EDHPDHRPPLPLRQDQDTGGPENSN 84
           E HP H  P   +Q    GG + +N
Sbjct: 173 EQHPQHHQPHHQQQHMMYGGQQGAN 197


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 10  EDHPDHRPPLPLRQDQDTGGPENSN 84
           E HP H  P   +Q    GG + +N
Sbjct: 175 EQHPQHHQPHHQQQHMMYGGQQGAN 199


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 8   RKTILTTAHHFPYVKTRIQVV-QKTQIILSPIE 103
           R+ ILT A HF  ++  IQ+  ++T+ ++  +E
Sbjct: 126 RRKILTPAFHFNILQEFIQIFNEETKRLVEDLE 158


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 8   RKTILTTAHHFPYVKTRIQVV-QKTQIILSPIE 103
           R+ ILT A HF  ++  IQ+  ++T+ ++  +E
Sbjct: 126 RRKILTPAFHFNILQEFIQIFNEETKRLVEDLE 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,121
Number of Sequences: 336
Number of extensions: 1919
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)