Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0667
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p pro...    61   5e-10
AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-P...    61   5e-10
BT023373-1|AAY55789.1|  330|Drosophila melanogaster IP01934p pro...    31   0.48 
BT023368-1|AAY55784.1|  330|Drosophila melanogaster IP01935p pro...    31   0.48 
AE014296-1696|AAF50236.2|  421|Drosophila melanogaster CG14176-P...    31   0.48 

>AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p
           protein.
          Length = 527

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 252 YGCAKDTPRCFPTVKG-KPSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWLE 419
           +GC + T  C  +V   +P Y Y  KHTPPCCL  +R    HVL+  E  G+R WL+
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFENVGIRYWLD 430



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 23/71 (32%), Positives = 37/71 (52%)
 Frame = +3

Query: 15  LSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRST 194
           L+ +P+P +LPFPE LY+Q  +      V    F  GR++  +   KQ   +  + Q   
Sbjct: 260 LAAMPEPFSLPFPEMLYMQAKIANLSTTVFPQAFQEGRRLFASFHTKQRRMDLRRRQFRE 319

Query: 195 FYKKYKMKIVV 227
            YKK ++K +V
Sbjct: 320 MYKKLQIKRIV 330


>AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-PA
           protein.
          Length = 572

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 252 YGCAKDTPRCFPTVKG-KPSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWLE 419
           +GC + T  C  +V   +P Y Y  KHTPPCCL  +R    HVL+  E  G+R WL+
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFENVGIRYWLD 430



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 23/71 (32%), Positives = 37/71 (52%)
 Frame = +3

Query: 15  LSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRST 194
           L+ +P+P +LPFPE LY+Q  +      V    F  GR++  +   KQ   +  + Q   
Sbjct: 260 LAAMPEPFSLPFPEMLYMQAKIANLSTTVFPQAFQEGRRLFASFHTKQRRMDLRRRQFRE 319

Query: 195 FYKKYKMKIVV 227
            YKK ++K +V
Sbjct: 320 MYKKLQIKRIV 330


>BT023373-1|AAY55789.1|  330|Drosophila melanogaster IP01934p
           protein.
          Length = 330

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
 Frame = -2

Query: 311 VGRFAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF 138
           +G F  D  +    + S S+ +  + +  D  + F F I C P+L++    Y  + + C+
Sbjct: 29  LGLFQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCY 88

Query: 137 ------*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSF 3
                  + T     ++ YL LG+      +  F+  Q   +W    +F F
Sbjct: 89  IKDKDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGF 139


>BT023368-1|AAY55784.1|  330|Drosophila melanogaster IP01935p
           protein.
          Length = 330

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
 Frame = -2

Query: 311 VGRFAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF 138
           +G F  D  +    + S S+ +  + +  D  + F F I C P+L++    Y  + + C+
Sbjct: 29  LGLFQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCY 88

Query: 137 ------*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSF 3
                  + T     ++ YL LG+      +  F+  Q   +W    +F F
Sbjct: 89  IKDKDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGF 139


>AE014296-1696|AAF50236.2|  421|Drosophila melanogaster CG14176-PB
           protein.
          Length = 421

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
 Frame = -2

Query: 311 VGRFAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF 138
           +G F  D  +    + S S+ +  + +  D  + F F I C P+L++    Y  + + C+
Sbjct: 120 LGLFQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCY 179

Query: 137 ------*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSF 3
                  + T     ++ YL LG+      +  F+  Q   +W    +F F
Sbjct: 180 IKDKDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGF 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,700,185
Number of Sequences: 53049
Number of extensions: 463034
Number of successful extensions: 1503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)