Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0664
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.18 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.7  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.9  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 162 WTSEALTRSNPSLHSVLRLYS 100
           W S+ + RSNPSL   L++++
Sbjct: 601 WVSKLIIRSNPSLEEKLQIFA 621


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 249 LRVWGRKEYLQALDGVG-EKFLKVFSEVANMW 341
           ++    KE  + L  +  +K L++  EVAN+W
Sbjct: 239 MQTTNEKEIFERLSALPVDKLLQISEEVANIW 270


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 300 EKFLKVFSEVANMW 341
           ++FL++  EVAN+W
Sbjct: 257 DEFLQISEEVANIW 270


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 390 YQGVRPADNWGLIVFKESELSNCKTVLLVNEV 485
           YQ  +   N+  IVF+ S L     V LV E+
Sbjct: 502 YQAQKGHPNFFRIVFQNSGLDKADMVHLVEEI 533


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 505  TPNHWYSTSLTRRTVLQLLNSLSLNTIRP 419
            T + W++T+ TRRT      + S  T RP
Sbjct: 1047 TTSPWWTTTTTRRTTTTRPTTTS-TTTRP 1074


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 300 EKFLKVFSEVANMW 341
           +K L++  EVAN+W
Sbjct: 255 DKLLQISEEVANIW 268


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 486 VPH*LEGQFYSCSTRS 439
           +PH   G   SC TRS
Sbjct: 345 MPHRCHGNLQSCPTRS 360


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 134 LLRVNASDVHVYCWSS 181
           L  +   +VH+ CW+S
Sbjct: 359 LFHMGGDEVHLGCWNS 374


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 423 LIVFKESELSNCKTVLLVN 479
           +++FK  ++ N   + LVN
Sbjct: 91  IVIFKTKDMRNSTNIFLVN 109


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 423 LIVFKESELSNCKTVLLVN 479
           +++FK  ++ N   + LVN
Sbjct: 91  IVIFKTKDMRNSTNIFLVN 109


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 329 YLTEHFEEFFADTVQRLKVFFSSPHAQLDIISIVIFVMHSVPQL 198
           +L  HF +     +Q   V+  S  A+LD I    +++   PQL
Sbjct: 38  FLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQL 81


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 329 YLTEHFEEFFADTVQRLKVFFSSPHAQLDIISIVIFVMHSVPQL 198
           +L  HF +     +Q   V+  S  A+LD I    +++   PQL
Sbjct: 38  FLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQL 81


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 329 YLTEHFEEFFADTVQRLKVFFSSPHAQLDIISIVIFVMHSVPQL 198
           +L  HF +     +Q   V+  S  A+LD I    +++   PQL
Sbjct: 38  FLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQL 81


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = -2

Query: 217 CTVFPSCFKSAMTRPTVNVDIGGVNSK*SVTAFGSPVIFSVLAIGVLLRATMFRGRATLI 38
           C    + + S M   T N+ I G+N    VTA+   +    + +  LL+   F  +   +
Sbjct: 336 CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTM 395

Query: 37  SNGVLY 20
           +  V Y
Sbjct: 396 NIKVNY 401


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = -2

Query: 217 CTVFPSCFKSAMTRPTVNVDIGGVNSK*SVTAFGSPVIFSVLAIGVLLRATMFRGRATLI 38
           C    + + S M   T N+ I G+N    VTA+   +    + +  LL+   F  +   +
Sbjct: 61  CVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTM 120

Query: 37  SNGVLY 20
           +  V Y
Sbjct: 121 NIKVNY 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,466
Number of Sequences: 336
Number of extensions: 3089
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)