Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0664
(527 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 75 5e-14
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 72 3e-13
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 59 3e-09
SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 58 4e-09
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 56 2e-08
SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13) 52 3e-07
SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07) 49 3e-06
SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08) 48 6e-06
SB_41061| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08) 35 0.036
SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.063
SB_41688| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09) 30 1.4
SB_40601| Best HMM Match : VWA_CoxE (HMM E-Value=6.3) 30 1.4
SB_19260| Best HMM Match : FIVAR (HMM E-Value=6.2) 29 2.4
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 29 3.1
SB_22161| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 28 5.5
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 28 5.5
SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2) 27 9.6
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 9.6
SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 9.6
SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7) 27 9.6
>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 1240
Score = 74.5 bits (175), Expect = 5e-14
Identities = 46/149 (30%), Positives = 70/149 (46%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP K F + + R V+LSN PI T E V D FE + MST+ V V
Sbjct: 271 CFDEPALKAVFNMVIYRKAEHVSLSNMPIKETFK-DKESGQVIDVFEPSVKMSTYLVAFV 329
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
+ D K T +RVW ++ + D + +K+ S + + PL
Sbjct: 330 VCDFKSKEATTK------RGTLVRVWAPEDNIDEGDYALSEAVKILSYYEKFFAVRYPLP 383
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESEL 449
K D++A+P++ +NWGLI ++ + L
Sbjct: 384 KQDLIAIPDF-AAGAMENWGLITYRLTSL 411
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Frame = +3
Query: 288 DGVGEKFLKVFSEVANMWQIPLPLKKLDMVALPNYQGVRPADNWGLIVFKESEL------ 449
DG +F + S + + P + ++A+P++ +NWGLI ++ + L
Sbjct: 542 DGYRNRFDALTSNINEVDGQYKPNQPPYLIAIPDFP-TGAMENWGLITYRMTSLLYRPGF 600
Query: 450 -----SNCKTVLLVNEVLYQWLGVYVTPAWW 527
+V++ +E+ +QW G VT WW
Sbjct: 601 SSDDNKQWISVVVAHELAHQWFGNLVTMKWW 631
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 71.7 bits (168), Expect = 3e-13
Identities = 41/149 (27%), Positives = 72/149 (48%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
C DEP K F I++ + +A+SN PI + E G D+FE T M T+ + +V
Sbjct: 377 CLDEPALKATFNITIEHRPDFIAISNMPIWKNETRNGR---TVDHFEKTVVMPTYLLAMV 433
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
+ D K G + +R + + ++ L+ K+ + + + I PL
Sbjct: 434 VCDF----GVKETKSARG--VMMRYYAPPDKVEQLNYAASIGNKILDDFEHYYNISYPLP 487
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESEL 449
K DM+A+P++ +NWGL+ ++E+ L
Sbjct: 488 KADMIAIPDF-AAGAMENWGLMTYRETAL 515
>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 791
Score = 58.8 bits (136), Expect = 3e-09
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP K F ++ P +M A +N + + N F +P M T+
Sbjct: 147 CFDEPALKATFNTTITHPSDMQAFTN---GAQVSSAPKGNLTMTSFATSPKMQTYLNAFD 203
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
+ + + T + + +++R R + + + +++ + IP PL
Sbjct: 204 VGYYELMEKT------SNSGVKVRTIARPGRKDQMPYALKAATESLNQLEQFFGIPYPLP 257
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKE------SELSN--CKTVLLV----NEVLYQWLGV 506
KLD++A P + + +NWGLI +E E SN K LL+ +E+ + W G
Sbjct: 258 KLDLIATP--ECLVAMENWGLIHMEEDGLLYKEEFSNEEIKQNLLIRWLPHEIAHMWFGN 315
Query: 507 YVTPAWW 527
VT +WW
Sbjct: 316 LVTMSWW 322
>SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 854
Score = 58.0 bits (134), Expect = 4e-09
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTP--IARTEN---ITGEPNAVTDYFELTPPMSTF 167
CFDEP K F ++ + AL+N P I +T + I ++ +F + PMST+
Sbjct: 260 CFDEPAMKATFTTTIVHEPDYTALTNMPEAINKTRSDGLIETRYHSNEGWFMKSVPMSTY 319
Query: 168 TVGLVIADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQ----ALDGVG------EKFLKV 317
+ ++ D K T+ N++ LRVW + + ALD EK+ KV
Sbjct: 320 LLAFIVCDFKHT-ETI---TGEHNNVTLRVWTTPDQINQTYFALDEAEKIITYFEKYYKV 375
Query: 318 FSEVANM-WQIPLPLKKLDMVALPNYQGVRPADNWGLIVFKESEL 449
+ P+ + +D++A+P++ +NWGLI F+E+ L
Sbjct: 376 MYPLPKQDIDNPIAVCLIDLIAIPDFSS-GAMENWGLITFRETAL 419
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEPG K F I++A + VALSN PI +++ I G+ + DYFE + MST+ V
Sbjct: 242 CFDEPGMKATFNITIAHRPDYVALSNMPIYQSKIIDGQRH---DYFEQSVVMSTYLVAFT 298
Query: 183 IAD 191
+ D
Sbjct: 299 VGD 301
>SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13)
Length = 302
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +3
Query: 219 YKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLKKLDMVALPNYQG 398
YK NG E+RVW +KE L + V S + IP PL K+D+VA+P++
Sbjct: 204 YKTRNG---EVRVWAQKEALDSTKLALSVAKNVLSYYEKFFNIPYPLPKIDLVAVPDF-A 259
Query: 399 VRPADNWGLIVFKESEL 449
+NWGL+ F+E L
Sbjct: 260 AGAMENWGLMTFREHYL 276
>SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07)
Length = 287
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Frame = +3
Query: 312 KVFSEVANMWQIPLPLKKLDMVALPNYQGVRPADNWGLIVFKESEL----SNCKTV---- 467
KV A + I PL K DM+ALP++ R +NWGL++++E L V
Sbjct: 14 KVLPFYAQYFGIDYPLPKADMIALPDFV-FRAMENWGLVMYREENLLWREDTSSEVHKQY 72
Query: 468 ---LLVNEVLYQWLGVYVTPAWW 527
L+ +E+ +QW G VT WW
Sbjct: 73 VGELVSHELAHQWFGNLVTMTWW 95
>SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08)
Length = 326
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
C DEP K F +++A VAL N PI+ + + + V Y++ + M T+ + V
Sbjct: 230 CLDEPALKATFNVTIAHHARYVALCNMPISSSTRVDNQ--IVDQYYQTSVVMPTYLLAFV 287
Query: 183 IADLKQLGNTVHYKDDNGNDI 245
+ + L N Y + G I
Sbjct: 288 VGEFWNLVNHTEYAESVGGKI 308
>SB_41061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Frame = +3
Query: 375 VALPNYQGVRPADNWGLIVFKESEL-----SNCK------TVLLVNEVLYQWLGVYVTPA 521
VA+P Y G +NWGLI++ E L SN + T ++ +E+++QW G VT
Sbjct: 3 VAIP-YFGPGAMENWGLILYAEDYLLWDADSNTEQNKQLVTSVIAHELVHQWFGNIVTLK 61
Query: 522 WW 527
WW
Sbjct: 62 WW 63
>SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08)
Length = 457
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
C D PG K + V+ P+++VAL + +E + + +T FE + ++ + LV
Sbjct: 96 CQDSPGVKATYSAKVSVPKDLVALMSAARTGSELDHQKQDLMTYQFEQKVAIPSYLIALV 155
Query: 183 IADLK 197
+ LK
Sbjct: 156 VGALK 160
>SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIART 98
CFDEP K F + + R V+LSN PI T
Sbjct: 58 CFDEPALKAVFNMVIYRKAEHVSLSNMPIKET 89
>SB_41688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 96 TENITGEPNAVTDYFELTPPMSTFTVGLVIADLKQLGNTVHYKDDNGNDIELRVWGRKEY 275
++ T PN Y L+ P + ++I + V Y+ DNG +I+L R +
Sbjct: 35 SQTATSNPNQNKYYLHLSEPCYLVVLPILIGFVNAAHELVVYR-DNGKEIDLD--NRAVF 91
Query: 276 LQALDGV 296
L A+DG+
Sbjct: 92 LSAVDGL 98
>SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09)
Length = 820
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 347 NLPHVRYLTEHFEEFFADTVQRLKVFFSSPHAQLDII 237
N P ++ E E FF D Q++K S HA++D++
Sbjct: 634 NTPETQHDVEAIERFFNDLSQQVKYSDLSEHARVDVL 670
>SB_40601| Best HMM Match : VWA_CoxE (HMM E-Value=6.3)
Length = 666
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 512 HVHTQPLVQYLID*KDSFTVAQLALFEHYQAPVISRPDALVVW 384
H + +V + I + F V + +EH Q PVI +PD ++W
Sbjct: 613 HDNVARIVHWAIAKEHGFEVKE-KWYEHKQLPVIEKPDLKILW 654
>SB_19260| Best HMM Match : FIVAR (HMM E-Value=6.2)
Length = 127
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 219 YKDDNGNDIELR-VWGRKEYLQALDGVGEKFLKVF-SEVANMWQI 347
Y DDN + ++ + EY++ L+ EKF K+ SE+A++ QI
Sbjct: 29 YDDDNSCGVNKDDIFKKGEYIEKLENAFEKFTKLINSELAHLQQI 73
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 348 PLPLKKLDMVALPNYQGVRPADNWGLIVFKESELSNCKT--VLLVNEVLYQWLGVYVTPA 521
P P +LD++ LP N L+ +S L+ + V + +E+ + W G+ +
Sbjct: 1495 PYPFSRLDLLILPKCFACMGLKNPNLVFLSQSVLAGDGSIRVRVAHEISHAWFGLLIGAK 1554
Query: 522 WW 527
W
Sbjct: 1555 DW 1556
>SB_22161| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 489
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 246 ELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPL 353
ELR WG K YLQ L E K E + IPL
Sbjct: 340 ELRRWGFKCYLQDLFTAPEAVTKYLCETYRVHDIPL 375
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 246 ELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPL 353
ELR WG K YLQ L E K E + IPL
Sbjct: 177 ELRRWGFKCYLQDLFTAPEAVTKYLCETYRVHDIPL 212
>SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2)
Length = 303
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 512 HVHTQPLVQYLID*KDSFTVAQLALFEHYQAPVISRPDALVVW 384
H + +V + I + F V + +EH PVI +PD ++W
Sbjct: 247 HDNVARIVHWAIAKEHGFEVKE-KWYEHELLPVIEKPDLKILW 288
>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 307
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 512 HVHTQPLVQYLID*KDSFTVAQLALFEHYQAPVISRPDALVVW 384
H + +V + I + F V + +EH PVI +PD ++W
Sbjct: 213 HDNVARIVHWAIAKEHGFEVKEKR-YEHELLPVIEKPDLKILW 254
>SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 352 KGICHMFATSLNTLRNFSPTP 290
KG CH FA L + R FS +P
Sbjct: 70 KGTCHKFAVKLISKRQFSVSP 90
>SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 279
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 512 HVHTQPLVQYLID*KDSFTVAQLALFEHYQAPVISRPDALVVW 384
H + +V + I + F V + +EH PVI +PD ++W
Sbjct: 213 HDNVARIVHWAIAKEHGFEVKE-KWYEHELLPVIEKPDLKILW 254
>SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 262 DEKNTFKRWTVSAKNSSKCSVR 327
+ TFKRW V A SS C++R
Sbjct: 442 ENTETFKRWEVQAGISSVCTLR 463
>SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7)
Length = 247
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 30 PFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLVIADLKQLGN 209
PF I ++ ++ + P+A N + E V+D F++ + F G + + Q G
Sbjct: 72 PFSIPTRVLKSSSSILSKPLAMLYNFSIESGIVSDKFKIAKVIPVFKKGSALIEFLQPGG 131
Query: 210 T 212
+
Sbjct: 132 S 132
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,177,729
Number of Sequences: 59808
Number of extensions: 400635
Number of successful extensions: 1179
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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