Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0664
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 80 1e-15
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 77 1e-14
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 77 1e-14
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 76 1e-14
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 74 6e-14
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 74 6e-14
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 67 8e-12
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 65 3e-11
U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical pr... 60 7e-10
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 36 0.018
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 29 1.6
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 29 1.6
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 29 1.6
AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical ... 29 2.1
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 28 4.8
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 28 4.8
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 28 4.8
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 28 4.8
AF078792-1|AAC26947.2| 352|Caenorhabditis elegans Serpentine re... 28 4.8
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 28 4.8
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 28 4.8
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 28 4.8
AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical ... 27 6.3
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 91.1 bits (216), Expect = 5e-19
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP YK + ++V P VA+SN + E+ G+P + F+ TP MS++ + +
Sbjct: 224 CFDEPAYKATWTVTVIHPNKTVAVSNGIEDKVED--GQPGFIISTFKPTPRMSSYLLAIF 281
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
I++ + + + + + RVW R E + E +K + I PL
Sbjct: 282 ISEFE------YNEATTKSGVRFRVWSRPEEKNSTMYAVEAGVKCLEYYEKYYNISFPLP 335
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVY 509
K DMVALP++ +NWGLI ++ES L V++ +E+ +QW G
Sbjct: 336 KQDMVALPDF-SAGAMENWGLITYRESALLYDPRIYSGSQKRRVAVVIAHELAHQWFGNL 394
Query: 510 VTPAWW 527
VT WW
Sbjct: 395 VTLKWW 400
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 91.1 bits (216), Expect = 5e-19
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP YK + ++V P VA+SN + E+ G+P + F+ TP MS++ + +
Sbjct: 236 CFDEPAYKATWTVTVIHPNKTVAVSNGIEDKVED--GQPGFIISTFKPTPRMSSYLLAIF 293
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
I++ + + + + + RVW R E + E +K + I PL
Sbjct: 294 ISEFE------YNEATTKSGVRFRVWSRPEEKNSTMYAVEAGVKCLEYYEKYYNISFPLP 347
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVY 509
K DMVALP++ +NWGLI ++ES L V++ +E+ +QW G
Sbjct: 348 KQDMVALPDF-SAGAMENWGLITYRESALLYDPRIYSGSQKRRVAVVIAHELAHQWFGNL 406
Query: 510 VTPAWW 527
VT WW
Sbjct: 407 VTLKWW 412
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 79.8 bits (188), Expect = 1e-15
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSN-TPIARTENITGEPNAVTDYFELTPPMSTFTVGL 179
C+DEPG K F ISV + LSN P+ ++ + E T F+ TPPMST+ +
Sbjct: 253 CWDEPGVKATFNISVRHNKKYTVLSNMPPVESHDHKSWEDQFKTTVFQTTPPMSTYLLAF 312
Query: 180 VIADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPL 359
I + +L + + + G I + VW E + ++ E +F + + +IP PL
Sbjct: 313 AIGEFVKLES----RTERG--IPVTVWTYPEDVMSMKFTLEYAPVIFDRLEDALEIPYPL 366
Query: 360 KKLDMVALPNYQGVRPADNWGLIVFKESELS 452
K+D++A N+ V +NWGL+VF+ + ++
Sbjct: 367 PKVDLIAARNFH-VGGMENWGLVVFEFASIA 396
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 76.6 bits (180), Expect = 1e-14
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSN-TPIARTENITGEPNAVTDYFELTPPMSTFTVGL 179
CFDEP YK F++++ ++ ALSN I+ T G+ AVT F +P MS++ V
Sbjct: 152 CFDEPIYKATFDVTLEVENHLTALSNMNVISETPTADGKRKAVT--FATSPKMSSYLVAF 209
Query: 180 VIADLKQLGNTVHYKDDNGNDIELRVW---GRKEYLQALDGVGEKFLKVFSEVANMWQIP 350
+ +L+ + + +E+RV+ G+KE Q + K + ++E + I
Sbjct: 210 AVGELE------YISAQTKSGVEMRVYTVPGKKEQGQYSLDLSVKCIDWYNE---WFDIK 260
Query: 351 LPLKKLDMVALPNYQGVRPADNWGLIVFKE----------SELSNCKTVLLV-NEVLYQW 497
PL K D++A+P++ + +NWGL+ ++E S + L+V +E+ + W
Sbjct: 261 YPLPKCDLIAIPDF-SMGAMENWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLW 319
Query: 498 LGVYVTPAWW 527
G VT WW
Sbjct: 320 FGNLVTMKWW 329
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 76.6 bits (180), Expect = 1e-14
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSN-TPIARTENITGEPNAVTDYFELTPPMSTFTVGL 179
CFDEP YK F++++ ++ ALSN I+ T G+ AVT F +P MS++ V
Sbjct: 216 CFDEPIYKATFDVTLEVENHLTALSNMNVISETPTADGKRKAVT--FATSPKMSSYLVAF 273
Query: 180 VIADLKQLGNTVHYKDDNGNDIELRVW---GRKEYLQALDGVGEKFLKVFSEVANMWQIP 350
+ +L+ + + +E+RV+ G+KE Q + K + ++E + I
Sbjct: 274 AVGELE------YISAQTKSGVEMRVYTVPGKKEQGQYSLDLSVKCIDWYNE---WFDIK 324
Query: 351 LPLKKLDMVALPNYQGVRPADNWGLIVFKE----------SELSNCKTVLLV-NEVLYQW 497
PL K D++A+P++ + +NWGL+ ++E S + L+V +E+ + W
Sbjct: 325 YPLPKCDLIAIPDF-SMGAMENWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLW 383
Query: 498 LGVYVTPAWW 527
G VT WW
Sbjct: 384 FGNLVTMKWW 393
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
T16G12.1 protein.
Length = 1890
Score = 76.2 bits (179), Expect = 1e-14
Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSN-TPIARTENITGEPNAVTDYFELTPPMSTFTVGL 179
C+DEP YK FE+SV P +M+ALSN I RT G T F T MST+ + L
Sbjct: 1154 CWDEPSYKGQFEVSVFHPTDMIALSNEVDIQRTIYDNG---WTTTKFATTNQMSTYLLAL 1210
Query: 180 VIADLKQLGNTVHYKDDNGNDIELRVW---GRKEYLQALDGVGEKFLKVFSEVANMWQIP 350
+ L + RVW G ++Y + V + F E N +
Sbjct: 1211 CVGHFSNLATVTR------TGVLTRVWTWSGMEQYGEFALNVTAGTID-FME--NYFSYD 1261
Query: 351 LPLKKLDMVALPNY-QGVRPADNWGLIVFKES------ELSNCKTVLLV-----NEVLYQ 494
PLKKLD++ALP Y +NWGLI+ + S + + + + V +EV++Q
Sbjct: 1262 FPLKKLDVMALPEYTMNAGAMENWGLIIGEYSLFMFDPDYATTRDITEVAETTAHEVVHQ 1321
Query: 495 WLGVYVTPAWW 527
W G VT WW
Sbjct: 1322 WFGDIVTLDWW 1332
Score = 70.9 bits (166), Expect = 5e-13
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Frame = +3
Query: 9 DEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLVIA 188
DEP YK F I+V P + VALSN I + +T F TP MS++ + +
Sbjct: 232 DEPSYKAKFTITVQYPASQVALSNMMETEPTKIDNIWSTIT--FPQTPKMSSYLIAFAV- 288
Query: 189 DLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLKKL 368
G V+ + N ++ R WG Q L + + ++ I PL K
Sbjct: 289 -----GPYVNSQYVNKHNTLTRAWGWPGTEQYLQFAAQNAGECLYQLGEYTGIKFPLSKA 343
Query: 369 DMVALPNYQGVRPADNWGLIVFKESELSNCKTVL-----------LVNEVLYQWLGVYVT 515
D + +P + +NWGLI++K ++ T + + +E+ +QW G VT
Sbjct: 344 DQLGMPEFL-AGAMENWGLIIYKYQYIAYNPTTMTTRNMEAAAKVMCHELAHQWFGDLVT 402
Query: 516 PAWW 527
AWW
Sbjct: 403 TAWW 406
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 74.1 bits (174), Expect = 6e-14
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP +K F++++ R + +A SN I ++ + + D FE + MST+ L
Sbjct: 335 CFDEPNFKATFQVAIIRNPHHIARSNMNILISKEY--KNGLIKDVFEKSVKMSTYL--LA 390
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVG-EKFLKVFSEVANMWQIPLPL 359
+A L G + IE+R++ ++ L G + ++ + + I PL
Sbjct: 391 VAVLDGYGYIKRLTRNTQKAIEVRLYAPQDMLTGQSEFGLDTTIRALEFFEDYFNISYPL 450
Query: 360 KKLDMVALPNYQGVRPADNWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGV 506
K+D++AL ++ +NWGL+ F++S L +++ +E+ +QW G
Sbjct: 451 DKIDLLALDDF-SEGAMENWGLVTFRDSALLFNERKASVVAKEHIALIICHEIAHQWFGN 509
Query: 507 YVTPAWW 527
VT WW
Sbjct: 510 LVTMDWW 516
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 74.1 bits (174), Expect = 6e-14
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP +K F++++ R + +A SN I ++ + + D FE + MST+ L
Sbjct: 335 CFDEPNFKATFQVAIIRNPHHIARSNMNILISKEY--KNGLIKDVFEKSVKMSTYL--LA 390
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVG-EKFLKVFSEVANMWQIPLPL 359
+A L G + IE+R++ ++ L G + ++ + + I PL
Sbjct: 391 VAVLDGYGYIKRLTRNTQKAIEVRLYAPQDMLTGQSEFGLDTTIRALEFFEDYFNISYPL 450
Query: 360 KKLDMVALPNYQGVRPADNWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGV 506
K+D++AL ++ +NWGL+ F++S L +++ +E+ +QW G
Sbjct: 451 DKIDLLALDDF-SEGAMENWGLVTFRDSALLFNERKASVVAKEHIALIICHEIAHQWFGN 509
Query: 507 YVTPAWW 527
VT WW
Sbjct: 510 LVTMDWW 516
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 66.9 bits (156), Expect = 8e-12
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP +K + +S+ P ALSN E+ + T Y + T MS++ + L
Sbjct: 177 CFDEPEFKATWNVSLEHPTGSTALSNG--IEVESKVNDDWKTTTY-KKTLKMSSYILALF 233
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
I D+ Q T+ N + +RV+ + +D V + I P++
Sbjct: 234 IGDI-QFKETI-----LNNGVRIRVYTDPVNIDRVDHALNISRIVLEGFERQFGIRYPME 287
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESELSNCK---TVLLVNEVLYQWLGVYVTPAWW 527
KLD V++ N++ +NWGL++ L T ++++E+ +QW G VT +W
Sbjct: 288 KLDFVSVQNFK-FGAMENWGLVIHNAYSLIGDPMDVTEIVIHEIAHQWFGNLVTMKYW 344
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 66.1 bits (154), Expect = 1e-11
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
CFDEP +K + ++V P ALSN +N + T FE T MS++ + +
Sbjct: 174 CFDEPEFKAIWHVTVVHPTGSTALSNA--KEIDNTKTNDDFSTTEFESTLKMSSYILAIF 231
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
+ D+ Q V N + +RV+ ++ ++D V + P +
Sbjct: 232 VGDV-QFKEAV-----TKNGVRIRVYSDPGHIDSVDHALNVSRIVLEGFEKQFGYPYEMD 285
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESEL--------SNCKTVLLVNEVLYQWLGVYVTP 518
KLD++A+ N++ +NWGLIV + L ++ + ++ +E+ +QW G VT
Sbjct: 286 KLDLIAVYNFR-YGAMENWGLIVHQAYTLIENLMPGNTDIISEVVAHEIAHQWFGNLVTM 344
Query: 519 AWW 527
+W
Sbjct: 345 KFW 347
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 64.9 bits (151), Expect = 3e-11
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
C D P K F+ + P +++N + + + GE T F TPPMST+
Sbjct: 299 CIDVPDMKAQFDTVIIHPTGTTSIANM-MENSTKVDGEWTTTT--FHRTPPMSTYLFAFS 355
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
++D L + +G + RV+ L + + V + + IP PL+
Sbjct: 356 VSDYPYL------ETFSGRGVRSRVYCDPTKLVDAQLITKSIGPVLDFYEDYFGIPYPLE 409
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESE---------LSNCKTV--LLVNEVLYQWLGVY 509
KLD+V +P V +NWGLI +++ +S V ++ +E+ +QW G
Sbjct: 410 KLDVVIVPALS-VTAMENWGLITIRQTNGLYTEGRFAISQKHDVQEIVAHELAHQWFGNL 468
Query: 510 VTPAWW 527
VT WW
Sbjct: 469 VTMKWW 474
>U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical
protein T12E12.6 protein.
Length = 529
Score = 60.5 bits (140), Expect = 7e-10
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Frame = +3
Query: 3 CFDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLV 182
C D P K F +S+ P + VA SNT IA ++ T F+ TP + + V
Sbjct: 37 CIDHPAVKALFRLSIVHPTDTVAQSNT-IAMDVHVENRKWQRT-IFQATPLLPAYLVAFS 94
Query: 183 IADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLK 362
+ L + + G + + R L+ LD L F +A + +PLPL
Sbjct: 95 VMPDSNL--QLSRQTSFGVTVRVNGESRGLVLRVLDCA----LASFEILAGLIDVPLPLN 148
Query: 363 KLDMVALPNYQGVRPADNWGLIVFKESELSNCKTV----LLVNEVLYQWLGVYVTPAWW 527
K+D + +P Y G +NWG I E+ ++ L+ +E+ + W+G T W
Sbjct: 149 KIDFILVPEYDG--GMENWGHITVSETLATSGDDAHLIYLIAHEIAHHWIGNRATIDSW 205
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 35.9 bits (79), Expect = 0.018
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Frame = +3
Query: 6 FDEPGYKTPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLVI 185
FD+ +K P I++ + + ++NT + ++ G+ T L P F +G ++
Sbjct: 343 FDQEAFKAPAAITLMHSKGSIVVANTGVKTKDD--GDAQTSTLNKVLDP---DFVIGDLV 397
Query: 186 ADLKQLGNTVHYKDDNGNDIELRVWGRKEYLQALDGVGEKFLKVFSEVANMWQIPLPLKK 365
A ++ T + I +R+W R E + + + + + ++ Q L K
Sbjct: 398 A--SEVNTT--------SGITIRIWTRPEVKHSTEQSLDYANQAIDAMEHILQSRLESKS 447
Query: 366 LDMVALPNYQ-GVRPADNW------GLIVFKESELSNCKT---VLLVNEVLYQWLGVYVT 515
LD+VA+P +Q G R + ++ ++ ++S N KT ++ N + QW G
Sbjct: 448 LDIVAVPGFQTGNRVSPSFIVLPEEDILYNEQSNDINQKTRIARMISNRIAAQWFGGITN 507
Query: 516 P 518
P
Sbjct: 508 P 508
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 276 LQALDGVGEKFLKVFSEVANMWQIPLPLKKLDMVA 380
LQ+L G+K VF +A WQIPL K ++ A
Sbjct: 1105 LQSL--AGKKLYTVFDMIAGFWQIPLDEKSKEITA 1137
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 276 LQALDGVGEKFLKVFSEVANMWQIPLPLKKLDMVA 380
LQ+L G+K VF +A WQIPL K ++ A
Sbjct: 1008 LQSL--AGKKLYTVFDMIAGFWQIPLDEKSKEITA 1040
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 276 LQALDGVGEKFLKVFSEVANMWQIPLPLKKLDMVA 380
LQ+L G+K VF +A WQIPL K ++ A
Sbjct: 1019 LQSL--AGKKLYTVFDMIAGFWQIPLDEKSKEITA 1051
>AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical
protein Y50D4B.5 protein.
Length = 369
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 15 PGYKTPFEISVARPRNMVALSNTPIARTENIT-GEPNAVTDYFELTPPMSTFT 170
P KT F I + + N+PI RTE E NA + F P+STF+
Sbjct: 113 PTTKTEFPIPSSSNFSTETEFNSPIKRTETFNEEESNATNETFLSKEPISTFS 165
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 372 MVALPNYQGVRPADNWGLIVFKESELSNCKTVLLVNEVLYQWLGVYVTPAW 524
M++L N+ G R + + + C V L +VL +W+ YV PA+
Sbjct: 569 MLSLMNHIGNRSVVDIVFVFIPQCLFLGCIFVYLCLQVLMKWIFFYVKPAY 619
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 27 TPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLVIADLKQLG 206
+P EI +P+ + S+ P T I + TDY E PMST+
Sbjct: 400 SPVEI---QPKGGIVNSSMPSTSTGYINNGMDHQTDYIEHQQPMSTYDQYHDHVQYIAPD 456
Query: 207 NTVHYKDDNGNDIEL 251
V+Y +++ N ++L
Sbjct: 457 GNVNYHNNHDNGVDL 471
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 27 TPFEISVARPRNMVALSNTPIARTENITGEPNAVTDYFELTPPMSTFTVGLVIADLKQLG 206
+P EI +P+ + S+ P T I + TDY E PMST+
Sbjct: 400 SPVEI---QPKGGIVNSSMPSTSTGYINNGMDHQTDYIEHQQPMSTYDQYHDHVQYIAPD 456
Query: 207 NTVHYKDDNGNDIEL 251
V+Y +++ N ++L
Sbjct: 457 GNVNYHNNHDNGVDL 471
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 21 YKTPFEISVARPRNMVALSNTPIAR--TENITGEPNAVTDYFELTPP 155
+ PFE+++ + ++++ N+P+++ E G P+ V Y ++ P
Sbjct: 504 HNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 21 YKTPFEISVARPRNMVALSNTPIAR--TENITGEPNAVTDYFELTPP 155
+ PFE+++ + ++++ N+P+++ E G P+ V Y ++ P
Sbjct: 503 HNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 549
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 372 MVALPNYQGVRPADNWGLIVFKESELSNCKTVLLVNEVLYQWLGVYVTPAW 524
M++L N+ G R + + + C V L +VL +W+ YV PA+
Sbjct: 569 MLSLMNHIGNRSVVDIVFVFIPQCLFLGCIFVYLCLQVLMKWIFFYVKPAY 619
>AF078792-1|AAC26947.2| 352|Caenorhabditis elegans Serpentine
receptor, class h protein40 protein.
Length = 352
Score = 27.9 bits (59), Expect = 4.8
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -2
Query: 313 LRNFSPTPSNA*RYSFRPHTRSSI-SFPLSSL*CTVFPSCFKSAMTRPTVNVDIGGVNSK 137
+R +PT + Y R H + F L V P F S + T+ + +NSK
Sbjct: 45 VRKSTPTMKSTVPYMIRAHLCTMFCDFTWGIL---VIPMMFWSVVCGYTLGISKYFINSK 101
Query: 136 *SVTAFGSPVIFSVLA-IGVLLRATMFRGRATLISN 32
+ FG ++ +VLA I +L FR +A + +N
Sbjct: 102 NILMYFGVWLMLAVLAMIAAILHLFEFRHQAVVSNN 137
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 21 YKTPFEISVARPRNMVALSNTPIAR--TENITGEPNAVTDYFELTPP 155
+ PFE+++ + ++++ N+P+++ E G P+ V Y ++ P
Sbjct: 504 HNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 21 YKTPFEISVARPRNMVALSNTPIAR--TENITGEPNAVTDYFELTPP 155
+ PFE+++ + ++++ N+P+++ E G P+ V Y ++ P
Sbjct: 504 HNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 372 MVALPNYQGVRPADNWGLIVFKESELSNCKTVLLVNEVLYQWLGVYVTPAW 524
M++L N+ G R + + + C V L +VL +W+ YV PA+
Sbjct: 569 MLSLMNHIGNRSVVDIVFVFIPQCLFLGCIFVYLCLQVLMKWIFFYVKPAY 619
>AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical
protein E04A4.1 protein.
Length = 333
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 377 DHIQFL*R*RNLPHVRYLTEHFEEFFADTVQRLKV-FFSSPHAQLDIISI 231
DH+ + N+ + T+HFE D+ +L++ FS H L+ +S+
Sbjct: 118 DHVLDIFHVTNISELEITTDHFETTIYDSFDKLEIESFSMYHIDLNRLSL 167
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 126 VTDYFELTPPMSTFTVGLVIADLKQLGNTVHYKDDNGNDIELRVW 260
V DY L P T TVGL +++ +H+ D G + +W
Sbjct: 42 VKDYGVLNPSKITATVGLNTGNVELNNTCLHFWDLGGQESLRELW 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,231,880
Number of Sequences: 27780
Number of extensions: 290872
Number of successful extensions: 904
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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