Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0662
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0W7D8 Cluster: Putative uncharacterized protein precur... 40 0.052
UniRef50_Q1JWR0 Cluster: Putative uncharacterized protein precur... 37 0.37
UniRef50_Q39ZD3 Cluster: Putative uncharacterized protein precur... 34 3.4
UniRef50_A7H8W6 Cluster: Hydroxylamine oxidase precursor; n=3; P... 34 3.4
UniRef50_A5GEG8 Cluster: Putative uncharacterized protein precur... 34 3.4
UniRef50_P13508 Cluster: Protein glp-1 precursor; n=27; Caenorha... 34 3.4
UniRef50_Q2RS86 Cluster: AsmA precursor; n=1; Rhodospirillum rub... 33 6.0
UniRef50_A7BTM5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_A5VUL3 Cluster: TRm24 transposase; n=1; Brucella ovis A... 33 6.0
UniRef50_Q59K89 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal alzh... 33 7.9
UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domai... 33 7.9
UniRef50_Q1L699 Cluster: Leucine-rich repeat protein 11; n=2; Pl... 33 7.9
UniRef50_Q8X0I0 Cluster: Related to regulator of deoxyribodipyri... 33 7.9
>UniRef50_A0W7D8 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter lovleyi SZ|Rep: Putative
uncharacterized protein precursor - Geobacter lovleyi SZ
Length = 418
Score = 39.9 bits (89), Expect = 0.052
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 325 DCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWH-WLGREN 447
DC +CHT + S++ ++ + C + +D+PQW W G ++
Sbjct: 153 DCQNCHTRHAFSKAEANEPEACQTCHMGFDHPQWEMWSGSKH 194
>UniRef50_Q1JWR0 Cluster: Putative uncharacterized protein
precursor; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
Putative uncharacterized protein precursor -
Desulfuromonas acetoxidans DSM 684
Length = 427
Score = 37.1 bits (82), Expect = 0.37
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +1
Query: 277 ELRHDNVQNEINVLEDDCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 426
E + D + + C CHT + S K C + YD+PQW
Sbjct: 134 EQKADQLAKGYRYQNNSCDECHTRHAFSLKEAQNPKACQQCHMGYDHPQW 183
>UniRef50_Q39ZD3 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter metallireducens GS-15|Rep:
Putative uncharacterized protein precursor - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 413
Score = 33.9 bits (74), Expect = 3.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 328 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 426
C SCHT S S + C + +D+PQW
Sbjct: 155 CDSCHTRHSFSVKEARDPRACRTCHMGFDHPQW 187
>UniRef50_A7H8W6 Cluster: Hydroxylamine oxidase precursor; n=3;
Proteobacteria|Rep: Hydroxylamine oxidase precursor -
Anaeromyxobacter sp. Fw109-5
Length = 442
Score = 33.9 bits (74), Expect = 3.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 328 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 426
C +CHT S++ + + C + +D+PQW
Sbjct: 169 CDACHTRHLFSKAEARRPEACQTCHMGFDHPQW 201
>UniRef50_A5GEG8 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Putative uncharacterized protein precursor - Geobacter
uraniumreducens Rf4
Length = 436
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 301 NEINVLEDDCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 426
N + +E C SCHTN + S + C + D+PQW
Sbjct: 148 NYCHNVESSCASCHTNHNTSLAIVRDPNSCAKCHMGPDHPQW 189
>UniRef50_P13508 Cluster: Protein glp-1 precursor; n=27;
Caenorhabditis|Rep: Protein glp-1 precursor -
Caenorhabditis elegans
Length = 1295
Score = 33.9 bits (74), Expect = 3.4
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 331 GSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGC 510
GS T S + SR+ P +D + P H+ S ++TS + E
Sbjct: 1198 GSRKTPTSAASSRETNHLTPPPSDGSFSSPSPHYYPTTTSTPNRMETSPEY-MFNHEMAP 1256
Query: 511 QINLCDILPPPPYESPENRH 570
+N PPPY+ P RH
Sbjct: 1257 PVNAMWYTTPPPYQDPNYRH 1276
>UniRef50_Q2RS86 Cluster: AsmA precursor; n=1; Rhodospirillum rubrum
ATCC 11170|Rep: AsmA precursor - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 1077
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +2
Query: 206 YNIQMANARLVVTVLRVDRPKTTES*DTTMYRMKLMSWRTTAVLATRTDLDRGVDRTKAK 385
Y+I++ + VV LR+D P ES D + + L T T D T+
Sbjct: 619 YDIEIPDPARVVRALRLDLPLAIESIDKLVLTGTVNGTANALTLRTTTTGDGATLNTEGT 678
Query: 386 FVRPLI*ITTIPNGIGWDERTASKF 460
V + T+ GIG+ A+ F
Sbjct: 679 LVGAFAGVPTLSMGIGFAHPDAASF 703
>UniRef50_A7BTM5 Cluster: Putative uncharacterized protein; n=2;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 507
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 328 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 426
C +CHT S S + C + +D+PQW
Sbjct: 187 CDACHTRHSFKTSEARDPRACSNCHMGFDHPQW 219
>UniRef50_A5VUL3 Cluster: TRm24 transposase; n=1; Brucella ovis ATCC
25840|Rep: TRm24 transposase - Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512)
Length = 168
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 280 LRHDNVQNEINVLED---DCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWH 429
LR D+++ +N +C +C+ R S + KS P A D P WH
Sbjct: 97 LRDDHLRQNLNFWRSVVVECFNCNLRRQTSDRSETKSTSAPIAPFPEDLPSWH 149
>UniRef50_Q59K89 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 176
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 274 CS-LWSIYSKYCDNKSSIRHLNIVCFHYTILQCYCYGIVC 158
CS ++ IY + C+++ + H C H L C C+GI C
Sbjct: 4 CSGVYHIYHRLCNHRDTYHHHPYTCHHIFCL-CICHGIYC 42
>UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal alzheimer
antigen, falz; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to fetal alzheimer antigen, falz - Nasonia
vitripennis
Length = 2670
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +2
Query: 38 ASRRRPYQTRTTGSHTRQAPFTQNSISRTTTKSET*EVVRTDDPITIAL*DRVMEAYNIQ 217
A + + TGS + Q T N++ TTT + T + ++T D I + + V ++
Sbjct: 1197 AKKTKLESDENTGSKSNQVVVTTNNVVTTTTVTTTTQQIKTIDGIVKNMQETVTSCSSVD 1256
Query: 218 MANARLVVTVLRVDRPKTT 274
+ + + +V + PKTT
Sbjct: 1257 V-KSEVKTSVTKSTSPKTT 1274
>UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domains;
n=2; Cryptosporidium|Rep: Splicing factor SRP40 like 2x
RRM domains - Cryptosporidium parvum Iowa II
Length = 416
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 535 PPPPYESPENRHNYGSEK 588
PPPPYE P R+ +GSE+
Sbjct: 292 PPPPYEDPRERYMHGSER 309
>UniRef50_Q1L699 Cluster: Leucine-rich repeat protein 11; n=2;
Plasmodium falciparum|Rep: Leucine-rich repeat protein
11 - Plasmodium falciparum
Length = 814
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 31 IRRIKTSTVSDADHRQPYASSAIYTELNFKDNNEIGDLRGCPDRRSHNNSIVRSCN 198
IR ++ + D + + +I + +N EI DL GC SH+ + +CN
Sbjct: 452 IRSLRIKLIYDESLKSSISPDSIMKTIYLSENIEILDLSGCSHLTSHHFQVFANCN 507
>UniRef50_Q8X0I0 Cluster: Related to regulator of
deoxyribodipyrimidine photo-lyase PHR1; n=3;
Pezizomycotina|Rep: Related to regulator of
deoxyribodipyrimidine photo-lyase PHR1 - Neurospora
crassa
Length = 1914
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 373 DKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDILPPPPYE 552
DK+K DLD + WH+LG ++ + N +R + + N D +P PP
Sbjct: 920 DKNKEQVKIDLDKENQVWHYLGPTST---EARAQYTENPSRKQHNSKSNFLDTIPKPPPT 976
Query: 553 SP 558
P
Sbjct: 977 YP 978
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,823,953
Number of Sequences: 1657284
Number of extensions: 12077037
Number of successful extensions: 35287
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35259
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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