Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0662
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2293|AAF55378.1| 623|Drosophila melanogaster CG4009-PA... 31 1.4
BT023214-1|AAY55630.1| 232|Drosophila melanogaster IP09857p pro... 30 3.2
BT023206-1|AAY55622.1| 236|Drosophila melanogaster IP09757p pro... 30 3.2
AE013599-1305|AAM68739.2| 247|Drosophila melanogaster CG30026-P... 30 3.2
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA... 29 4.2
BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p pro... 29 7.3
AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p pro... 29 7.3
AE014297-366|AAN14327.1| 187|Drosophila melanogaster CG10999-PC... 29 7.3
AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB... 29 7.3
AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA... 29 7.3
>AE014297-2293|AAF55378.1| 623|Drosophila melanogaster CG4009-PA
protein.
Length = 623
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 448 CSLVPANAIGDSRNLNQRP-DKLCFCPVYSSIQICSCGKNRSRPPRH*FHSVHCRVLAL 275
C + P N + D+RNL+ R D C +Y I R PPR + + R+++L
Sbjct: 79 CGVPPRNCLNDTRNLHYRTLDGSCNNLLYPEFGIAVSRYRRLLPPRQVEQAPNARLISL 137
>BT023214-1|AAY55630.1| 232|Drosophila melanogaster IP09857p
protein.
Length = 232
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 110 SISRTTTKSET*EVVRTDDPITIAL*DRVMEAYNIQMANARLVVTVLRVDRPKTTES*DT 289
SI+ TTT++ + T++P T +L E + T + TTE T
Sbjct: 36 SITTTTTEAPVTTTI-TEEPTTESLTTTTTETSSTFSTTEPAATTTTEISTTSTTEPSTT 94
Query: 290 TMYRMKLMSWRTTAVLAT 343
T+ K+ S TTA++ T
Sbjct: 95 TLTTKKIPS-TTTAIITT 111
>BT023206-1|AAY55622.1| 236|Drosophila melanogaster IP09757p
protein.
Length = 236
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 110 SISRTTTKSET*EVVRTDDPITIAL*DRVMEAYNIQMANARLVVTVLRVDRPKTTES*DT 289
SI+ TTT++ + T++P T +L E + T + TTE T
Sbjct: 40 SITTTTTEAPVTTTI-TEEPTTESLTTTTTETSSTFSTTEPAATTTTEISTTSTTEPSTT 98
Query: 290 TMYRMKLMSWRTTAVLAT 343
T+ K+ S TTA++ T
Sbjct: 99 TLTTKKIPS-TTTAIITT 115
>AE013599-1305|AAM68739.2| 247|Drosophila melanogaster CG30026-PA
protein.
Length = 247
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 110 SISRTTTKSET*EVVRTDDPITIAL*DRVMEAYNIQMANARLVVTVLRVDRPKTTES*DT 289
SI+ TTT++ + T++P T +L E + T + TTE T
Sbjct: 32 SITTTTTEAPVTTTI-TEEPTTESLTTTTTETSSTFSTTEPAATTTTEISTTSTTEPSTT 90
Query: 290 TMYRMKLMSWRTTAVLAT 343
T+ K+ S TTA++ T
Sbjct: 91 TLTTKKIPS-TTTAIITT 107
>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
protein.
Length = 3396
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 403 LDYDYPQWHWLGRENSFKIPIQTSRHSNIAR 495
+D Y + G +N+FK+ QT RH N+ R
Sbjct: 1037 VDTRYQSSFFFGCQNTFKLAGQTGRHDNVVR 1067
>BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p
protein.
Length = 383
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 355 GSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDIL 534
G+R+R S L + +W + F IQ+ R + ++ L D+
Sbjct: 278 GNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDF---IQSIRAAKQVKAHLARGGKLSDLP 334
Query: 535 PPPPYESPE 561
PPPP E+P+
Sbjct: 335 PPPPSENPD 343
>AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p
protein.
Length = 367
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 355 GSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDIL 534
G+R+R S L + +W + F IQ+ R + ++ L D+
Sbjct: 262 GNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDF---IQSIRAAKQVKAHLARGGKLSDLP 318
Query: 535 PPPPYESPE 561
PPPP E+P+
Sbjct: 319 PPPPSENPD 327
>AE014297-366|AAN14327.1| 187|Drosophila melanogaster CG10999-PC,
isoform C protein.
Length = 187
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 355 GSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDIL 534
G+R+R S L + +W + F IQ+ R + ++ L D+
Sbjct: 82 GNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDF---IQSIRAAKQVKAHLARGGKLSDLP 138
Query: 535 PPPPYESPE 561
PPPP E+P+
Sbjct: 139 PPPPSENPD 147
>AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB,
isoform B protein.
Length = 383
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 355 GSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDIL 534
G+R+R S L + +W + F IQ+ R + ++ L D+
Sbjct: 278 GNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDF---IQSIRAAKQVKAHLARGGKLSDLP 334
Query: 535 PPPPYESPE 561
PPPP E+P+
Sbjct: 335 PPPPSENPD 343
>AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA,
isoform A protein.
Length = 383
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 355 GSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDIL 534
G+R+R S L + +W + F IQ+ R + ++ L D+
Sbjct: 278 GNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDF---IQSIRAAKQVKAHLARGGKLSDLP 334
Query: 535 PPPPYESPE 561
PPPP E+P+
Sbjct: 335 PPPPSENPD 343
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,277,438
Number of Sequences: 53049
Number of extensions: 597730
Number of successful extensions: 1928
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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