Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0657
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   1.7  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   5.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.0  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 8    SSIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIH 124
            S +E MKY+ ++D +     + A R Y+ + E     IH
Sbjct: 887  SMLERMKYEKTIDIYGHVTCLRAHRNYMVQTEDQYIFIH 925


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 83  PSSLRCSWIAANGP*KPGTSCFQYCFF 3
           P  L  S+ A + P  P T C   CFF
Sbjct: 177 PHKLLKSYSAGSFPDAPETRCLLRCFF 203


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 252 NLRAILKKKSGKMQRLGILSIAQGL 326
           N RA +KK S +   L +  +AQGL
Sbjct: 548 NKRAKIKKSSSEKNPLALQLMAQGL 572


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 252 NLRAILKKKSGKMQRLGILSIAQGL 326
           N RA +KK S +   L +  +AQGL
Sbjct: 548 NKRAKIKKSSSEKNPLALQLMAQGL 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,563
Number of Sequences: 2352
Number of extensions: 7240
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)