Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0656
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   8.2  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   8.2  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 324 HMDIIYFSLFHLNINSVVLKCLWN 253
           + +I+YFS    +INS V   L+N
Sbjct: 331 YYNILYFSRIMFHINSAVNPILYN 354



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 359 YFISLLTFIALNIWI 315
           +FI LL F AL  WI
Sbjct: 301 FFICLLPFRALTFWI 315


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 751 NFEYFRKCILLM 716
           NFEYF++ ILLM
Sbjct: 205 NFEYFQRKILLM 216


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 751 NFEYFRKCILLM 716
           NFEYF++ ILLM
Sbjct: 131 NFEYFQRKILLM 142


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 754 LNFEYFRKCI 725
           +N +YF+KCI
Sbjct: 133 INMDYFKKCI 142


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 754 LNFEYFRKCI 725
           +N +YF+KCI
Sbjct: 133 INMDYFKKCI 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,905
Number of Sequences: 336
Number of extensions: 3100
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)