Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0652
         (358 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   2.6  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   3.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   3.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   3.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   3.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   6.0  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           22   6.0  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           22   6.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           22   7.9  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           22   7.9  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           22   7.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           22   7.9  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           22   7.9  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           22   7.9  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           22   7.9  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    22   7.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    22   7.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 195 TAMSAGPPEPPRCARDSGSQMRGPPPP 275
           +++S G P P R A   G     PPPP
Sbjct: 762 SSVSTGMPSPSRSAFADGIGSPPPPPP 788


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 216 PEPPRCARDSGSQMRGPPPPVR 281
           P PP         M G PPP+R
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIR 267


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 232 APGTAGPRCAARHRLYAPPRPSPLTGPTS 318
           APGTAGP  A      A P+P   + P S
Sbjct: 66  APGTAGPNAAT--VTAATPQPPAASMPPS 92


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 190 LSPPCLRVPPNHQDAPGTAGPRCAARHRLYAPPRPSPLTG 309
           L+PP   +       PG A     A  R ++ P+ SP++G
Sbjct: 526 LNPPAYLLASPVTGLPGVAPVPALATGRGWSSPQASPVSG 565


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 318  AGGTGQR*WSRWRVQAVAGRASGTRCPGR 232
            +GG+  R  SR R Q+   R SG+R   R
Sbjct: 1123 SGGSRSRSRSRSRSQSAGSRKSGSRSRSR 1151


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +1

Query: 214  PPNHQDAPGTAGPRCAARHRLYAPP---RPSPLTG 309
            PP     P TA P     H LYA P   +PSPL G
Sbjct: 1261 PPASPLVPDTAVPD---PHSLYAIPNKVKPSPLAG 1292


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 319 SWWDRSEVMVSVARTGGGGPRIWDPL 242
           SWW R+E+ V ++      P I++ L
Sbjct: 365 SWWRRNEITVVMSLISFFFPMIFEAL 390


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 127 MWVVCYSVVTICLQ*TLVSRYLSPPCLRVPP 219
           M  V   +VT+C+   + S  + PP   V P
Sbjct: 1   MLKVVVGLVTVCVLLAVTSGQIDPPTTTVAP 31


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 127 MWVVCYSVVTICLQ*TLVSRYLSPPCLRVPP 219
           M  V   +VT+C+   + S  + PP   V P
Sbjct: 1   MLKVVVGLVTVCVLLAVTSGQIDPPTTTVAP 31


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 178 PPPPTTTTTTVWTD 191



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 178 PPPPTTTTTTVWTD 191



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 178 PPPPTTTTTTVWTD 191



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 177 PPPPTTTTTTVWTD 190



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 244 PPPPTTTTTTVWTD 257


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 177 PPPPTTTTTTVWTD 190



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 244 PPPPTTTTTTVWTD 257


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 178 PPPPTTTTTTVWTD 191



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 PPPPVRATETITSD 305
           PPPP   T T+ +D
Sbjct: 245 PPPPTTTTTTVWTD 258


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 187  IARRAFTASRWSRRCSRLPTCSSRRTF 107
            + R  FT+S   +RCS +P  +    F
Sbjct: 930  LCRNGFTSSPDCQRCSGVPETAEHAMF 956


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,319
Number of Sequences: 2352
Number of extensions: 10777
Number of successful extensions: 54
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)