Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0651
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30940.1 68417.m04393 potassium channel tetramerisation domai... 54 1e-07
At3g09030.1 68416.m01059 potassium channel tetramerisation domai... 53 2e-07
At2g24240.1 68415.m02895 potassium channel tetramerisation domai... 53 2e-07
At5g55000.2 68418.m06850 potassium channel tetramerisation domai... 51 9e-07
At5g55000.1 68418.m06849 potassium channel tetramerisation domai... 51 9e-07
At5g41330.1 68418.m05023 potassium channel tetramerisation domai... 40 0.002
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 32 0.35
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 29 3.2
At2g27820.1 68415.m03373 prephenate dehydratase family protein 29 4.3
At1g80630.1 68414.m09462 leucine-rich repeat family protein 29 4.3
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 28 7.5
At3g07130.1 68416.m00849 serine/threonine protein phosphatase fa... 27 9.9
At1g33950.1 68414.m04208 avirulence-responsive family protein / ... 27 9.9
At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative... 27 9.9
>At4g30940.1 68417.m04393 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 60 SKQWVKLNVGGTYFLTTKTTLCR-DPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFS 236
S +K NVGG F TT TTL +SF L E+ +L + G IDR+P F+
Sbjct: 4 SNDRIKFNVGGRIFETTATTLANAGRDSFFGALFDENWNL----SQPGDLFIDRNPDCFA 59
Query: 237 PVLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVK 353
+L+ LR G L I +I E + +EA FY + + +R K
Sbjct: 60 VLLDLLRTGDLNIPPNIPERLLHKEAMFYGLIDHLRTAK 98
>At3g09030.1 68416.m01059 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 460
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +3
Query: 72 VKLNVGGTYFLTTKTTLCRD-PNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 248
VKLNVGG F T +T+ P+S L L S + IDRDP F+ +LN
Sbjct: 10 VKLNVGGEIFETNASTIQSSCPDSLLAALSTSTSH------GSNPVFIDRDPEIFAVILN 63
Query: 249 YLRHGKLVINND--IAEEGVLEEAEFYNITELIRL 347
LR G+L N+ +++ +L+EA +Y + L+RL
Sbjct: 64 LLRTGRLPANSSGVFSKQELLDEAMYYGVESLLRL 98
>At2g24240.1 68415.m02895 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/116 (31%), Positives = 57/116 (49%)
Frame = +3
Query: 60 SKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSP 239
SK +K NVGG F TT TTL + + +D +S +++ + +DR+ F+
Sbjct: 4 SKDRIKFNVGGRLFETTATTLANAGRDSFFGALFDDEWNLSPLEDSILF-VDRNSDCFAV 62
Query: 240 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHV 407
+L+ LR G L + +I E + EA FY + + +R K R L DS K +
Sbjct: 63 LLDLLRTGDLNVPANIPERLLHREASFYGLLDHVRTAKWGPFDGNRLRLSDSVKGI 118
>At5g55000.2 68418.m06850 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 298
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 72 VKLNVGGTYFLTTKTTLC-RDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 248
V+LN+GG F TT TL R+P+S L + + + + G IDRD +F +LN
Sbjct: 11 VRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAMCQE-SKKGYVFIDRDGKHFRHILN 69
Query: 249 YLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKE 356
+LR G + +D +L EA++Y + L +K+
Sbjct: 70 WLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKD 105
>At5g55000.1 68418.m06849 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 290
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 72 VKLNVGGTYFLTTKTTLC-RDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 248
V+LN+GG F TT TL R+P+S L + + + + G IDRD +F +LN
Sbjct: 11 VRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAMCQE-SKKGYVFIDRDGKHFRHILN 69
Query: 249 YLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKE 356
+LR G + +D +L EA++Y + L +K+
Sbjct: 70 WLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKD 105
>At5g41330.1 68418.m05023 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 458
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 72 VKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLNY 251
V +NVGG F TTK TL L DS L ET + +DRDP FS +L
Sbjct: 13 VSINVGGRIFQTTKQTL---------SLAGTDSLLSQLATETTRF-VDRDPDLFSVLLYI 62
Query: 252 LRHGKLVINNDIAE-EGVLEEAEFYNITELI 341
LR G L + + +++E+ +Y I +
Sbjct: 63 LRTGNLPARSRAFDVRDLIDESRYYGIESFL 93
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 9 SDFMEENIQKFNNERRSSKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDL 176
+D+M N+QK N + S W K++ G LT++ + L R + E+S +
Sbjct: 372 TDYMPPNLQKQNEQDFSESDWEKIDNGSRSGLTSRGSFSSTSQLLLQRKLFEESQV 427
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 162 EDSDLISDRDETGAYLIDRDPTYFSPVLNYLRHGKLVI 275
ED D + D D+ YL D + YF+ LN + +L I
Sbjct: 212 EDEDDLEDEDDERRYLDDHENPYFTMTLNPKKKSQLHI 249
>At2g27820.1 68415.m03373 prephenate dehydratase family protein
Length = 424
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 282 DIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDS 395
+I E+G+ ++A N+T + L +E I R RP K S
Sbjct: 278 EILEDGIQDDAS--NVTRFVMLAREPIIPRTDRPFKTS 313
>At1g80630.1 68414.m09462 leucine-rich repeat family protein
Length = 578
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 63 KQWVKLNVGGTYFLTTKTTLCRDPNSFLYR-LVQEDSDLIS 182
K +K+N+ G F+T K+ + N L R ++ D D IS
Sbjct: 163 KGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFIS 203
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 492 NIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDI 590
N+ YN G DE+ LC+ + LN ND+
Sbjct: 244 NLKGSYNSGLDEYGLKLCLQQQLLSKILNQNDL 276
>At3g07130.1 68416.m00849 serine/threonine protein phosphatase
family protein contains similarity to purple acid
phosphatase [Arabidopsis thaliana]
gi|20257489|gb|AAM15914
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +3
Query: 39 FNNERRSSKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDR 218
FN SS + N GG +F+ + D ++ Y +++D + DR T +
Sbjct: 300 FNESGSSSTLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKV-DRSVTPWLVASW 358
Query: 219 DPTYFSPVLNYLRHGK 266
P ++S + R +
Sbjct: 359 HPPWYSSYTAHYREAE 374
>At1g33950.1 68414.m04208 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana), NTGP4
GB:AAD09518 (Nicotiana tabacum); contains Pfam profile:
PF00735 cell division protein (members of this family
bind GTP)
Length = 311
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 DLISDRDETGAYLIDRD-PTYFSPVLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRL 347
D++ + ET + RD PT+ V+ + K+VI+N +EG E + + + L+
Sbjct: 145 DVLEECKETLEDYLGRDCPTFIKEVMRMSSNRKVVIDNKTHDEGKKAE-QVHKLLSLVDD 203
Query: 348 VKERIC 365
++ C
Sbjct: 204 IRRSKC 209
>At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar
to allyl alcohol dehydrogenase GI:9758497 from
[Arabidopsis thaliana]
Length = 351
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 213 DRDPTYFSPVLNYLRHGKLVINNDIAE 293
D+ P + VL Y+R GK+ DIAE
Sbjct: 297 DKYPKFLDFVLPYIREGKITYVEDIAE 323
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,996,093
Number of Sequences: 28952
Number of extensions: 292321
Number of successful extensions: 745
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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