Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0649
(570 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 216 3e-55
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 209 4e-53
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 184 1e-45
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 167 2e-40
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 150 3e-35
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 138 6e-32
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 137 2e-31
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 127 2e-28
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 125 8e-28
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 120 2e-26
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 113 2e-24
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 112 6e-24
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 101 1e-20
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 98 1e-19
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 93 5e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 91 1e-17
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 73 6e-12
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 70 3e-11
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 69 6e-11
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 68 2e-10
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 68 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 66 4e-10
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 60 5e-08
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 58 1e-07
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 57 3e-07
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 55 1e-06
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 54 3e-06
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 54 3e-06
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 52 7e-06
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 49 7e-05
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 47 3e-04
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 46 8e-04
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 43 0.004
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 43 0.004
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 43 0.006
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 40 0.031
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 40 0.031
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 38 0.13
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 37 0.38
UniRef50_Q57U50 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 3.6
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 4.7
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 6.2
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 6.2
UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3; ... 32 8.2
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 32 8.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 216 bits (527), Expect = 3e-55
Identities = 99/137 (72%), Positives = 119/137 (86%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+
Sbjct: 92 ESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSM 151
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
SQRKTCYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL
Sbjct: 152 SQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLH 211
Query: 210 DVCIRKVKVLKRPRFEI 160
DV IRKVKVLK+PRF++
Sbjct: 212 DVYIRKVKVLKKPRFDL 228
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 209 bits (510), Expect = 4e-53
Identities = 96/137 (70%), Positives = 115/137 (83%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K +
Sbjct: 89 EDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNN 148
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 149 QIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLH 208
Query: 210 DVCIRKVKVLKRPRFEI 160
DV +RKVK+LK+P+FE+
Sbjct: 209 DVFVRKVKMLKKPKFEL 225
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 184 bits (448), Expect = 1e-45
Identities = 88/145 (60%), Positives = 112/145 (77%), Gaps = 3/145 (2%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K
Sbjct: 484 EDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVN 543
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
+KTCYAQ +Q+R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL+
Sbjct: 544 QNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQ 603
Query: 210 DVCIRKVKVLKRPRFE---ILEVDG 145
+V IRKVK+LK P+F+ ++EV G
Sbjct: 604 NVYIRKVKILKAPKFDLGKLMEVHG 628
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 167 bits (405), Expect = 2e-40
Identities = 76/135 (56%), Positives = 105/135 (77%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T +
Sbjct: 91 VQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQI 150
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
+KT YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V
Sbjct: 151 KKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNV 210
Query: 204 CIRKVKVLKRPRFEI 160
IRKVK+LK+P+F++
Sbjct: 211 HIRKVKLLKQPKFDL 225
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 150 bits (363), Expect = 3e-35
Identities = 71/137 (51%), Positives = 94/137 (68%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K
Sbjct: 15 EDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE- 73
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL
Sbjct: 74 DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLS 133
Query: 210 DVCIRKVKVLKRPRFEI 160
+RKVKVLK+P+ ++
Sbjct: 134 GALVRKVKVLKKPKLDL 150
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 138 bits (335), Expect = 6e-32
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL-- 391
V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S
Sbjct: 94 VDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGK 153
Query: 390 -SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 214
S TCYA+ +QVRAIR+K+ IT + + E LI + K IEK I+PL
Sbjct: 154 QSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPL 213
Query: 213 RDVCIRKVKVLKRPRFEILEV 151
+++ IRKVKVLKRP+ + ++
Sbjct: 214 QNITIRKVKVLKRPKLDATKI 234
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 137 bits (331), Expect = 2e-31
Identities = 73/150 (48%), Positives = 101/150 (67%), Gaps = 14/150 (9%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K
Sbjct: 88 EEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGES 147
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIA 253
++KT YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI ++A
Sbjct: 148 QKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLA 207
Query: 252 KDIEKACHGIYPLRDVCIRKVKVLKRPRFE 163
+ I I+P+ +V IRKVKVLK P+ +
Sbjct: 208 EKIRIEGSSIFPIHNVFIRKVKVLKTPKVD 237
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 127 bits (306), Expect = 2e-28
Identities = 56/134 (41%), Positives = 92/134 (68%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT Q
Sbjct: 90 VEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQ 149
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
RKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++
Sbjct: 150 RKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNI 209
Query: 204 CIRKVKVLKRPRFE 163
+RKVK++KRP+ +
Sbjct: 210 TLRKVKLVKRPKVD 223
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 125 bits (301), Expect = 8e-28
Identities = 64/138 (46%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDS 394
E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T N +
Sbjct: 74 EDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTT 132
Query: 393 LSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 214
R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL
Sbjct: 133 RYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPL 190
Query: 213 RDVCIRKVKVLKRPRFEI 160
DV +RKVK+L++P+ ++
Sbjct: 191 HDVFVRKVKILQKPKLDL 208
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 120 bits (289), Expect = 2e-26
Identities = 53/144 (36%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q
Sbjct: 94 VQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQ 153
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
+ CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++
Sbjct: 154 SRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLREL 213
Query: 204 CIRKVKVLKRPRFE---ILEVDGT 142
IRKV+V++ P+F+ +L GT
Sbjct: 214 RIRKVRVVRTPKFDAQALLSAHGT 237
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 113 bits (273), Expect = 2e-24
Identities = 53/109 (48%), Positives = 77/109 (70%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 244
+KT YA+ Q++ IRK M +IT++ + EL + V+ L + K +
Sbjct: 151 QIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 112 bits (269), Expect = 6e-24
Identities = 50/129 (38%), Positives = 84/129 (65%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
+KTCY +H+ + IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++
Sbjct: 103 KKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNC 162
Query: 204 CIRKVKVLK 178
C+RKVK +K
Sbjct: 163 CVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 101 bits (242), Expect = 1e-20
Identities = 45/120 (37%), Positives = 77/120 (64%)
Frame = -1
Query: 537 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 358
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 357 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 178
Q RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 156 QKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 97.9 bits (233), Expect = 1e-19
Identities = 43/62 (69%), Positives = 54/62 (87%)
Frame = -1
Query: 345 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 166
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 165 EI 160
E+
Sbjct: 171 EL 172
Score = 40.7 bits (91), Expect = 0.023
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 442
E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 86 EDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 92.7 bits (220), Expect = 5e-18
Identities = 46/129 (35%), Positives = 74/129 (57%)
Frame = -1
Query: 558 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 379
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 378 TCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCI 199
YA + R +R M + +T + + ++ + + I +I + C I + V I
Sbjct: 149 HTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYI 208
Query: 198 RKVKVLKRP 172
KVKV+K P
Sbjct: 209 TKVKVIKAP 217
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 91.5 bits (217), Expect = 1e-17
Identities = 48/134 (35%), Positives = 74/134 (55%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
+ V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++
Sbjct: 89 QLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRF 148
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
+RK C+ + +R +R + E + ++ + +V KL + + +A I R
Sbjct: 149 QRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCR 208
Query: 210 DVCIRKVKVLKRPR 169
DV IR+VKV+KRPR
Sbjct: 209 DVMIRRVKVVKRPR 222
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 72.5 bits (170), Expect = 6e-12
Identities = 46/138 (33%), Positives = 73/138 (52%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
KT IRKK+ E +T E V +I D +++ K IYP+R +
Sbjct: 137 IKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRI 187
Query: 204 CIRKVKVLKRPRFEILEV 151
IRK +VL P +I+E+
Sbjct: 188 EIRKSEVLHFPEEKIVEL 205
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -1
Query: 279 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 160
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 40
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 69.3 bits (162), Expect = 6e-11
Identities = 41/131 (31%), Positives = 70/131 (53%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
+K+ A+RKKM E + + + + + +++ ++A D+ I P+R V
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKV 192
Query: 204 CIRKVKVLKRP 172
I K+KVLK P
Sbjct: 193 EIAKIKVLKYP 203
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/120 (35%), Positives = 69/120 (57%)
Frame = -1
Query: 531 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 352
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQM 134
Query: 351 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 172
+AIR+ M +I+ + + ++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 135 QAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYP 217
T A+ +Q RAIRK+M ++I + + E + + + +SI + I++A IYP
Sbjct: 119 --TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYP 176
Query: 216 LRDVCIRKVKVLKRP 172
+R IRK +VL+ P
Sbjct: 177 IRQAEIRKTEVLEEP 191
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 66.5 bits (155), Expect = 4e-10
Identities = 42/133 (31%), Positives = 71/133 (53%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK--- 126
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
A+ +Q+ +IR+ M ++ + E +N+++ +A +I K IYPLR
Sbjct: 127 ------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIYKNTKNIYPLR 180
Query: 210 DVCIRKVKVLKRP 172
V I K +++ RP
Sbjct: 181 RVEIGKSELVYRP 193
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 59.7 bits (138), Expect = 5e-08
Identities = 41/131 (31%), Positives = 66/131 (50%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + +
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRR 131
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
KT +Q RAIR M +I+ ++ + + + + + +I K IYP+R V
Sbjct: 132 CKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRV 186
Query: 204 CIRKVKVLKRP 172
IRK+++L P
Sbjct: 187 EIRKIELLAEP 197
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 58.4 bits (135), Expect = 1e-07
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V+G F G +L D +R + ++ + + +V T DGY LRV + FT
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT------- 122
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYP 217
R+ C + +Q AIRK M EI+ + S L E++ ++ S+A I+++ IYP
Sbjct: 123 RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYP 180
Query: 216 LRDVCIRKVKVLKRP 172
LR V I K K+L P
Sbjct: 181 LRKVEIAKSKLLWVP 195
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/123 (29%), Positives = 70/123 (56%)
Frame = -1
Query: 528 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 349
M++T D +R +V++ + ++A +DV+T DG +RV + T +S+ KT +Q +
Sbjct: 83 MEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKK 133
Query: 348 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 169
AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL P
Sbjct: 134 AIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TPT 192
Query: 168 FEI 160
EI
Sbjct: 193 TEI 195
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 54.8 bits (126), Expect = 1e-06
Identities = 41/132 (31%), Positives = 60/132 (45%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V L F+GM+LT D +R +V++ + + DV T DG LR+ + T
Sbjct: 78 VDDGRALTQFNGMELTRDYVRNLVRRGSSKVMVIKDVTTKDGGKLRMEVLAIT------- 130
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
T T IRK + + + + S+ +V I I D+ IYPLR V
Sbjct: 131 --TYRCTRTHKHLIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKV 188
Query: 204 CIRKVKVLKRPR 169
I K+KVL+ PR
Sbjct: 189 EIIKIKVLEYPR 200
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 53.6 bits (123), Expect = 3e-06
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = -1
Query: 561 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 382
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV +
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLAL--------- 129
Query: 381 KTCYAQH-TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
T Y H Q IRK M +++ + E V ++I ++A +I I PLR
Sbjct: 130 -TAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKA 188
Query: 204 CIRKVKVLKRP 172
I K KVL P
Sbjct: 189 EIEKSKVLFAP 199
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = -1
Query: 525 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 346
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 345 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 172
IR+ M +++ + ++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 134 IRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 52.4 bits (120), Expect = 7e-06
Identities = 36/118 (30%), Positives = 60/118 (50%)
Frame = -1
Query: 525 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 346
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 345 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 172
IR+ M + + + V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 134 IRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 49.2 bits (112), Expect = 7e-05
Identities = 35/129 (27%), Positives = 61/129 (47%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV + T +
Sbjct: 79 VSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDH 138
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
KT IR +M +II + E V+ ++ + I C ++PL+ V
Sbjct: 139 HKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRV 189
Query: 204 CIRKVKVLK 178
I K +V++
Sbjct: 190 EIFKSEVIE 198
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 47.2 bits (107), Expect = 3e-04
Identities = 33/127 (25%), Positives = 63/127 (49%)
Frame = -1
Query: 558 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 379
G++ L F G T+ +R +++++ I+ IDV T DGY++R+ + T K
Sbjct: 86 GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK------- 138
Query: 378 TCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCI 199
Q + ++IR K +++ V + + ++ S+ +I+ IYP R V I
Sbjct: 139 --RVQTSVKQSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVI 196
Query: 198 RKVKVLK 178
RK ++L+
Sbjct: 197 RKSQLLQ 203
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 45.6 bits (103), Expect = 8e-04
Identities = 35/128 (27%), Positives = 58/128 (45%)
Frame = -1
Query: 558 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 379
G+ F G ++ D +R MV++ + I+ + KT DGY L V I + L+ K
Sbjct: 75 GKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VIKIVLVSDSKLTANK 133
Query: 378 TCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCI 199
+R K+ I + L E+ +I D++ DI +YP++ + I
Sbjct: 134 R--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEI 185
Query: 198 RKVKVLKR 175
RK +VL R
Sbjct: 186 RKSEVLGR 193
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 43.2 bits (97), Expect = 0.004
Identities = 26/117 (22%), Positives = 55/117 (47%)
Frame = -1
Query: 537 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 358
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 357 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 187
++R I ++ I + + N + + D I I++ + P+++ I ++K
Sbjct: 157 RIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKRVIPIKNFIISRIK 213
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 43.2 bits (97), Expect = 0.004
Identities = 35/127 (27%), Positives = 57/127 (44%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 385
V G F G ++T D LR +VK+ + I+ ++ V T D +R+ ++S
Sbjct: 74 VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL---------TISC 124
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 205
A Q A+R + + +L +VN ++ I+KD+ K +YP R V
Sbjct: 125 YTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRV 184
Query: 204 CIRKVKV 184
I K KV
Sbjct: 185 EIIKSKV 191
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 42.7 bits (96), Expect = 0.006
Identities = 30/119 (25%), Positives = 58/119 (48%)
Frame = -1
Query: 537 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 358
F G TTD +R M+++ + I+A+ VKT D +++ + T T A+ +
Sbjct: 83 FTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSS 133
Query: 357 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 181
Q + +R+ + +++ E++ ++ +A ++ IYPL+ V I K KVL
Sbjct: 134 QQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 40.3 bits (90), Expect = 0.031
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = -1
Query: 564 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLS 388
V G F+G ++T + +R MVKK + +++ I V L+V FT
Sbjct: 75 VAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQVTITAFTIN---- 130
Query: 387 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRD 208
+A+ +QV+ +R KM +++ ++ V+ ++ ++K + C I+P+R
Sbjct: 131 -----HARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKMFAECKPIFPVRR 185
Query: 207 VCIRK 193
+ I K
Sbjct: 186 IEIIK 190
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 40.3 bits (90), Expect = 0.031
Identities = 32/119 (26%), Positives = 56/119 (47%)
Frame = -1
Query: 537 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 358
F G + D +R +V++ + I+ DVKT+D ++ V + T+ + +K
Sbjct: 83 FIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF------ 136
Query: 357 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 181
IRK + + I + E V LI D I D+ A IYPL+ + +RK +++
Sbjct: 137 ---QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV 192
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 38.3 bits (85), Expect = 0.13
Identities = 28/126 (22%), Positives = 57/126 (45%)
Frame = -1
Query: 537 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 358
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK------- 134
Query: 357 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 178
A+R + ++I V + + V I DI + +R + + KVK+++
Sbjct: 135 --HALRLIIRDVIENTVPQMNIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEKVKLVR 192
Query: 177 RPRFEI 160
+I
Sbjct: 193 TAEEQI 198
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 36.7 bits (81), Expect = 0.38
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 143 VPSTSRISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVM 322
+P+ S + GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2007 LPTNSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARAR 2065
Query: 323 ISHIFFLIALT*VCWA*HVLRWLKES 400
F +A+ + +++WL S
Sbjct: 2066 KQPFFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q57U50 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1747
Score = 34.7 bits (76), Expect = 1.5
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 140 EVPSTSRISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGI---NLFTTSLSSE 301
++PS S ++RG N + QTS+ MPW F++S S + N F++S S++
Sbjct: 1501 KLPSVSNTAQRGKLNGLFHKSQTSQINKMPWGRFTISHNPPSNVSLPNAFSSSYSAD 1557
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 330 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 160
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVEE 101
Query: 159 LEV 151
L +
Sbjct: 102 LSL 104
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 3.6
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = -1
Query: 561 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 382
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 381 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 244
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 4.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 307 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 414
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 527 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 402
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 6.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 384 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 238
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3;
Borrelia burgdorferi group|Rep: Putative uncharacterized
protein - Borrelia burgdorferi (Lyme disease spirochete)
Length = 282
Score = 32.3 bits (70), Expect = 8.2
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 492 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR-KTCYAQHTQVRAIRKKMCEIIT 316
+K QT I + +K + +L V+ I TN L ++ + A+ ++R T
Sbjct: 87 EKLQTEIPSQFGLKNSMFELLNVYKIDSTNGTRLQEKMNSSLAESQKMRRQFYSSLSYNT 146
Query: 315 RDVTNSELREVVNKLIPDSIAKD-IEKACHGI 223
D+ N L E+VNKL D A D I+K GI
Sbjct: 147 TDIFN--LAEIVNKLYKDPKAHDTIKKISGGI 176
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 32.3 bits (70), Expect = 8.2
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = -1
Query: 528 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR-VFCIGFTNKDSLSQRKTCYAQHTQV 352
+++ L W K Q LI+A T Y+L V + S+S ++TC A+ +
Sbjct: 37 LNVAPGALYWHFKNKQELIDA------TSRYLLAPVLGRNDEQRASISAQETC-AEMRSL 89
Query: 351 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 241
K E+I+ ++N +LR+ + LI DS+ + E
Sbjct: 90 MMQTKDGAEVISAALSNQQLRQELESLISDSLKEPNE 126
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,860,318
Number of Sequences: 1657284
Number of extensions: 10604636
Number of successful extensions: 31383
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 30430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31361
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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