Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0649
(570 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 210 8e-55
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 210 8e-55
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 210 8e-55
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 204 5e-53
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 185 4e-47
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 148 6e-36
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 29 5.8
AF274591-1|AAK00808.1| 1050|Drosophila melanogaster leucine-rich... 28 7.7
AF142343-1|AAF66608.1| 1360|Drosophila melanogaster glycoprotein... 28 7.7
AE014134-2451|AAO41188.1| 1039|Drosophila melanogaster CG8930-PE... 28 7.7
AE014134-2450|AAN10866.1| 1360|Drosophila melanogaster CG8930-PD... 28 7.7
AE014134-2449|AAN10865.1| 1360|Drosophila melanogaster CG8930-PC... 28 7.7
AE014134-2448|AAN10864.1| 1360|Drosophila melanogaster CG8930-PB... 28 7.7
AE014134-2447|AAF53367.3| 1360|Drosophila melanogaster CG8930-PA... 28 7.7
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 210 bits (514), Expect = 8e-55
Identities = 98/137 (71%), Positives = 115/137 (83%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD
Sbjct: 92 EDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQ 151
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL
Sbjct: 152 SQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLH 211
Query: 210 DVCIRKVKVLKRPRFEI 160
DV IRKVKVLK+PRF++
Sbjct: 212 DVYIRKVKVLKKPRFDV 228
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 210 bits (514), Expect = 8e-55
Identities = 98/137 (71%), Positives = 115/137 (83%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD
Sbjct: 42 EDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQ 101
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL
Sbjct: 102 SQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLH 161
Query: 210 DVCIRKVKVLKRPRFEI 160
DV IRKVKVLK+PRF++
Sbjct: 162 DVYIRKVKVLKKPRFDV 178
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 210 bits (514), Expect = 8e-55
Identities = 98/137 (71%), Positives = 115/137 (83%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD
Sbjct: 92 EDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQ 151
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 211
SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL
Sbjct: 152 SQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLH 211
Query: 210 DVCIRKVKVLKRPRFEI 160
DV IRKVKVLK+PRF++
Sbjct: 212 DVYIRKVKVLKKPRFDV 228
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 204 bits (499), Expect = 5e-53
Identities = 97/138 (70%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD
Sbjct: 93 EDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQ 152
Query: 390 SQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 214
SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL
Sbjct: 153 SQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 212
Query: 213 RDVCIRKVKVLKRPRFEI 160
DV IRKVKVLK+PRF++
Sbjct: 213 HDVYIRKVKVLKKPRFDV 230
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 185 bits (450), Expect = 4e-47
Identities = 86/123 (69%), Positives = 103/123 (83%)
Frame = -1
Query: 528 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 349
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 348 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 169
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 168 FEI 160
F++
Sbjct: 121 FDV 123
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 148 bits (358), Expect = 6e-36
Identities = 67/97 (69%), Positives = 81/97 (83%)
Frame = -1
Query: 570 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 391
E VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD
Sbjct: 92 EDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQ 151
Query: 390 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVV 280
SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 152 SQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 196 SDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 348
+ AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 264 TSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
>AF274591-1|AAK00808.1| 1050|Drosophila melanogaster leucine-rich
repeat-containingG protein-coupled receptor 2 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 918 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 962
>AF142343-1|AAF66608.1| 1360|Drosophila melanogaster glycoprotein
hormone receptor II protein.
Length = 1360
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 1132 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 1176
>AE014134-2451|AAO41188.1| 1039|Drosophila melanogaster CG8930-PE,
isoform E protein.
Length = 1039
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 811 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 855
>AE014134-2450|AAN10866.1| 1360|Drosophila melanogaster CG8930-PD,
isoform D protein.
Length = 1360
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 1132 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 1176
>AE014134-2449|AAN10865.1| 1360|Drosophila melanogaster CG8930-PC,
isoform C protein.
Length = 1360
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 1132 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 1176
>AE014134-2448|AAN10864.1| 1360|Drosophila melanogaster CG8930-PB,
isoform B protein.
Length = 1360
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 1132 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 1176
>AE014134-2447|AAF53367.3| 1360|Drosophila melanogaster CG8930-PA,
isoform A protein.
Length = 1360
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 ASTAFAVKFHQLRGSR-NGASSTLSPFGCKHRAEGRCHGRPSRCP 251
A+ + +F +LR R N ASS S C R+ HG PS P
Sbjct: 1132 AANPYQYQFAELRQQRQNRASSISSENFCSSRSSSWRHGPPSSAP 1176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,488,060
Number of Sequences: 53049
Number of extensions: 511001
Number of successful extensions: 1398
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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