Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0643
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 97 5e-20
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 97 5e-20
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 97 5e-20
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 97 5e-20
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 97 5e-20
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 97 5e-20
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 97 5e-20
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 47 7e-05
BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 4.7
BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor p... 31 4.7
BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 4.7
AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 4.7
AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8 (cystatin-re... 31 4.7
AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related epidid... 31 4.7
BC117279-1|AAI17280.1| 780|Homo sapiens CCDC128 protein protein. 31 6.3
BC111059-1|AAI11060.1| 574|Homo sapiens CCDC128 protein protein. 31 6.3
AK172762-1|BAD18745.1| 780|Homo sapiens protein ( Homo sapiens ... 31 6.3
AK172753-1|BAD18739.1| 615|Homo sapiens protein ( Homo sapiens ... 31 6.3
AC093635-1|AAX93161.1| 769|Homo sapiens unknown protein. 31 6.3
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 97.5 bits (232), Expect = 5e-20
Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 180
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 181 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYA 357
+KV N + DG IEG A + + AKL V KF +LATDY NYA
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 358 IAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAVDNFIKEHSKEIDSSKLVHTD 522
+ Y+C + H F WIL+RN L + ++ N + S ID K+ TD
Sbjct: 130 LVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILT--SNNIDVKKMTVTD 181
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 47.2 bits (107), Expect = 7e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +1
Query: 271 AKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA 450
AKL V KF +LATDY NYA+ Y+C + H F WIL+RN L +
Sbjct: 12 AKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPET 68
Query: 451 KTAVDNFIKEHSKEIDSSKLVHTD 522
++ N + S ID K+ TD
Sbjct: 69 VDSLKNILT--SNNIDVKKMTVTD 90
>BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor
protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 134
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related
epididymal spermatogenic protein protein.
Length = 142
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ALLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 135
AL+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 17 ALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC117279-1|AAI17280.1| 780|Homo sapiens CCDC128 protein protein.
Length = 780
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 581 CFPCSVITLELVNLQASSEKSVCTSFEESISLECSL-MKLSTAVLASPSSFLFL 423
CF ++ +L +L+ E S+CTS + +LE S MK TAV +++ L
Sbjct: 351 CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIAL 404
>BC111059-1|AAI11060.1| 574|Homo sapiens CCDC128 protein protein.
Length = 574
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 581 CFPCSVITLELVNLQASSEKSVCTSFEESISLECSL-MKLSTAVLASPSSFLFL 423
CF ++ +L +L+ E S+CTS + +LE S MK TAV +++ L
Sbjct: 351 CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIAL 404
>AK172762-1|BAD18745.1| 780|Homo sapiens protein ( Homo sapiens
cDNA FLJ23923 fis, clone COL03279. ).
Length = 780
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 581 CFPCSVITLELVNLQASSEKSVCTSFEESISLECSL-MKLSTAVLASPSSFLFL 423
CF ++ +L +L+ E S+CTS + +LE S MK TAV +++ L
Sbjct: 351 CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIAL 404
>AK172753-1|BAD18739.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ23914 fis, clone CAS01989. ).
Length = 615
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 581 CFPCSVITLELVNLQASSEKSVCTSFEESISLECSL-MKLSTAVLASPSSFLFL 423
CF ++ +L +L+ E S+CTS + +LE S MK TAV +++ L
Sbjct: 186 CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIAL 239
>AC093635-1|AAX93161.1| 769|Homo sapiens unknown protein.
Length = 769
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 581 CFPCSVITLELVNLQASSEKSVCTSFEESISLECSL-MKLSTAVLASPSSFLFL 423
CF ++ +L +L+ E S+CTS + +LE S MK TAV +++ L
Sbjct: 351 CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIAL 404
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,555,966
Number of Sequences: 237096
Number of extensions: 1983868
Number of successful extensions: 4383
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4367
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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