Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0641
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical pr... 32 0.37
AC024790-1|AAK84609.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.37
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 3.5
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 3.5
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 3.5
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 3.5
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 29 4.6
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 4.6
Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical p... 28 6.0
U29537-8|ABS83848.1| 258|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical
protein R10D12.13b protein.
Length = 270
Score = 46.4 bits (105), Expect = 2e-05
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Frame = +1
Query: 151 KRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSXXXXXXXXXYK 330
++ PV FL ++ KYL P + F + + D ++ + + T +
Sbjct: 10 EKLPV-FLSRYQKYLEPVDGQIF---ADNDDFVVQSIMKQIRGQQKMTEKEFQKRNYRFN 65
Query: 331 ALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT-----ENASFLNLIL 495
A+Q + + ++FS+ +M R P L++ ++G++L DEE + R T +++ L+
Sbjct: 66 AMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPTVSRDKSESTWSTLMD 125
Query: 496 ETVDHNHMREVKNVQMLE-EGIHETPEASEFSLN------DSTNENINFQHKRKWGEFTT 654
D + E +N+Q E EG + + +N DS E NF + + G+ +
Sbjct: 126 RLEDSTEIAERRNLQEREWEGSRDLDDGGRDHINRFMSHVDSHAE--NFVPEEEEGDEES 183
Query: 655 PDTKPDYIPENRKQ 696
+ D I RK+
Sbjct: 184 TEKVEDEIETMRKE 197
>Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical
protein R10D12.13a protein.
Length = 268
Score = 41.9 bits (94), Expect = 5e-04
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Frame = +1
Query: 151 KRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSXXXXXXXXXYK 330
++ PV FL ++ KYL P + F + + D ++ + + T +
Sbjct: 10 EKLPV-FLSRYQKYLEPVDGQIF---ADNDDFVVQSIMKQIRGQQKMTEKEKRNYR--FN 63
Query: 331 ALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT-----ENASFLNLIL 495
A+Q + + ++FS+ +M R P L++ ++G++L DEE + R T +++ L+
Sbjct: 64 AMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPTVSRDKSESTWSTLMD 123
Query: 496 ETVDHNHMREVKNVQMLE-EGIHETPEASEFSLN------DSTNENINFQHKRKWGEFTT 654
D + E +N+Q E EG + + +N DS E NF + + G+ +
Sbjct: 124 RLEDSTEIAERRNLQEREWEGSRDLDDGGRDHINRFMSHVDSHAE--NFVPEEEEGDEES 181
Query: 655 PDTKPDYIPENRKQ 696
+ D I RK+
Sbjct: 182 TEKVEDEIETMRKE 195
>Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical
protein R10D12.13c protein.
Length = 226
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Frame = +1
Query: 325 YKALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT-----ENASFLNL 489
+ A+Q + + ++FS+ +M R P L++ ++G++L DEE + R T +++ L
Sbjct: 20 FNAMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPTVSRDKSESTWSTL 79
Query: 490 ILETVDHNHMREVKNVQMLE-EGIHETPEASEFSLN------DSTNENINFQHKRKWGEF 648
+ D + E +N+Q E EG + + +N DS E NF + + G+
Sbjct: 80 MDRLEDSTEIAERRNLQEREWEGSRDLDDGGRDHINRFMSHVDSHAE--NFVPEEEEGDE 137
Query: 649 TTPDTKPDYIPENRKQ 696
+ + D I RK+
Sbjct: 138 ESTEKVEDEIETMRKE 153
>Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical
protein F31C3.6a protein.
Length = 554
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 337 QKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRITENASFLNLILETVDHNH 516
+++ ++YF QM + +PL + L + KER R L +I+E V+ N
Sbjct: 334 KRLIFSSEYFDSAQMTHPSPLAIQFLYDLRRVVDVAKERIRQRRFIPALPVIIEDVE-NE 392
Query: 517 MREVKNVQ-MLEEGIHETPEASEFSLNDSTNENINFQHKRKWGEFTTPDTK 666
+ V+ V+ ++ TPE+S S S + + + + E T P T+
Sbjct: 393 IDYVEAVEGPVDIASSATPESSPRSEQKSVDSGRESRDESEEDEETAPGTE 443
>AC024790-1|AAK84609.1| 315|Caenorhabditis elegans Hypothetical
protein Y47D7A.3 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 109 VRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSD 279
V +C ++Q AL + + S + + GK + K F+N + K F+N VH SD
Sbjct: 234 VSSCSEVQSALRLAEISLIFPSITVGKLNGIKNSKSFQNFMTPKILNFQNLVHLTSD 290
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +1
Query: 451 RDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEFSLNDSTNENINFQHK 630
RD+++EN LN L ++ H + + E +HE DS E H
Sbjct: 395 RDKMSENMKQLNADLVVIEKQHKTVKDQISLASEELHE---------YDSQGEAQIMAHH 445
Query: 631 RKWGEFTTPDTKPDYIPENRKQRVI 705
K+ + + T D EN Q+++
Sbjct: 446 TKYLDLLSKSTMLDDTTENYPQQIV 470
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 424 YLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEF 585
+L D ++KE DRI +++ ++ D +M EV ++ L+E EA ++
Sbjct: 187 FLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQY 240
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 424 YLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEF 585
+L D ++KE DRI +++ ++ D +M EV ++ L+E EA ++
Sbjct: 187 FLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQY 240
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 424 YLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEF 585
+L D ++KE DRI +++ ++ D +M EV ++ L+E EA ++
Sbjct: 187 FLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQY 240
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 424 YLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEF 585
+L D ++KE DRI +++ ++ D +M EV ++ L+E EA ++
Sbjct: 187 FLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQY 240
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 148 YKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETS 297
YK V M FGK P + E +S +NYVHYLS+ S S
Sbjct: 2180 YKDPVVPEPMDFGKIQLPER-RTREYLSRKAKLAEKNYVHYLSNECSHRS 2228
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 415 VGQYLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEFSLN 594
+GQ E++++ + E+ + +ET + N R++K + + + E + E S
Sbjct: 113 LGQENVQEKMEQYKLMEEDLLAMQSRIETSEDNFARQMKEFEAQKHAMEERIKELELSAT 172
Query: 595 DSTNENINFQHKRKWGEFTTPDTKPDY-IPENRKQRVISAPEKKLL 729
D+ N + R + PD+ + ++R I+ E KLL
Sbjct: 173 DANNTTVG--SFRGTLDDILKKNDPDFTLTSGYEERKINDLEAKLL 216
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 148 YKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETS 297
YK V M FGK P + E +S +NYVHYLS+ S S
Sbjct: 2180 YKDPVVPEPMDFGKIQLPER-RTREYLSRKAKLAEKNYVHYLSNECSHRS 2228
>Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical
protein K03H1.11 protein.
Length = 296
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 400 LYEQLVGQYLTDEEIKERDRITENASFLNLILETVD 507
L +LVG ++DE++ + ++T+NA L L +D
Sbjct: 97 LENELVGDEISDEQLAQLLQLTKNAPLKQLALSEID 132
>U29537-8|ABS83848.1| 258|Caenorhabditis elegans Hypothetical
protein F28B12.1b protein.
Length = 258
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 139 LEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYL 273
+ +Y+ + + F + AP+ ++S+ D+TFR V+YL
Sbjct: 1 MALYRARSFQISITFHRMSAPSPSPSISRLNSNSDETFRIVVNYL 45
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +1
Query: 391 NPLLYEQLVGQYLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETP 570
NPL Q + + E ++ D ++E L LET+ H R K L E H T
Sbjct: 345 NPLFTYQAYPKLI--EAFEKEDSLSEKVESLRFSLETMPEAHYRTAK---FLME--HLTR 397
Query: 571 EASEFSLNDSTNENI 615
SL D T++N+
Sbjct: 398 LCKSKSLTDMTSKNL 412
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +1
Query: 391 NPLLYEQLVGQYLTDEEIKERDRITENASFLNLILETVDHNHMREVKNVQMLEEGIHETP 570
NPL Q + + E ++ D ++E L LET+ H R K L E H T
Sbjct: 362 NPLFTYQAYPKLI--EAFEKEDSLSEKVESLRFSLETMPEAHYRTAK---FLME--HLTR 414
Query: 571 EASEFSLNDSTNENI 615
SL D T++N+
Sbjct: 415 LCKSKSLTDMTSKNL 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,751,828
Number of Sequences: 27780
Number of extensions: 315205
Number of successful extensions: 774
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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