Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0640
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.12 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +1

Query: 175 FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLC-LCTH 351
           + L FS    ++     + F +++   F  SE +  +++     YFR +  KT C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 352 SSFCGIRALAVPLLL 396
             +C +    +  LL
Sbjct: 413 LVYCSLAIFVLCELL 427


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 96  GGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDV 212
           G +T L   +CLLH +     L+ +    G L  + + V
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFILLQV 306


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 492 ILDHLTDVLSGVGVCDLI 545
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 630 HPDPRAEFGTRVAFSVRSGENRYYLDNE*NGV 725
           +PD + E GT    +++     YYL    NG+
Sbjct: 750 NPDIKVEDGTLTINNIQKTNEGYYLCEAVNGI 781


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 687 PRCEPKTQPSCR 652
           PRC P  +PSC+
Sbjct: 31  PRCPPIYEPSCQ 42


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 493 SLIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFCSLRELILTLVPNSARG 663
           SLII   +  + +F   LIS  S+    + +      S   S +EL + ++PN   G
Sbjct: 24  SLIINTFYSNKEIFLRELISNSSDALDKIRYESLTNPSRLDSGKELYIKIIPNKNDG 80


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 715 YSLSR*YRFSPLRTENATLVPNSARG 638
           YS+ +   F  + T+N  L+   ARG
Sbjct: 239 YSIKKLASFQGIGTDNVYLIRTDARG 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,111
Number of Sequences: 336
Number of extensions: 4068
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)