Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0640
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    26   1.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   1.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.3  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        24   5.9  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      24   5.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 133 RRHASAARNVLPPRRRNCCRPSLEKTKPR 47
           R HASA +    PR R+ C  +   T+ R
Sbjct: 67  RMHASARKRAYCPRTRSACAETFPSTRRR 95


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 451 LVSAKTQKHVERVVTVALVREEVQPMRVCHRRN 353
           ++  K Q++ ER   +A  REE++ MR  H R+
Sbjct: 31  ILMTKQQEYTERRELIA--REEMEKMRAAHERD 61


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 584  CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 471
            CG K++ +DP    E+        +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 381 CTSSLTKATVTTLSTCFCVFADTSAGVYC 467
           C  +++  TVT  STC    AD  + + C
Sbjct: 27  CAIAVSGTTVTLQSTCKLFTADVVSSITC 55


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 381 CTSSLTKATVTTLSTCFCVFADTSAGVYC 467
           C  +++  TVT  STC    AD  + + C
Sbjct: 14  CAIAVSGTTVTLQSTCKLFTADVVSSITC 42


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +3

Query: 501 HLTDVLSGVGVCDLIDFIWIQPHLLFTTSHNRGCKPLLQLEGTHPDPRAEFGT 659
           H+TD+       +L+ F     +LL+T        P+  L   H D R    T
Sbjct: 281 HMTDIHGATVYNNLLKFYTESGNLLYTAKIPNSTYPVSALTWGHNDKRIFIAT 333


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,670
Number of Sequences: 2352
Number of extensions: 16557
Number of successful extensions: 56
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)