Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0640
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 271 8e-73
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 271 8e-73
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 271 8e-73
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 271 8e-73
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 268 6e-72
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 0.98
AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-P... 29 6.9
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 9.1
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 9.1
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 9.1
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 9.1
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 271 bits (664), Expect = 8e-73
Identities = 136/198 (68%), Positives = 146/198 (73%)
Frame = -1
Query: 632 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 453
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 452 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 273
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 66 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 125
Query: 272 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 93
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 126 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 185
Query: 92 XXELLQTFAREDEAALTA 39
EL+ A+EDE A A
Sbjct: 186 KQELIALHAKEDEIAAKA 203
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 271 bits (664), Expect = 8e-73
Identities = 136/198 (68%), Positives = 146/198 (73%)
Frame = -1
Query: 632 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 453
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 452 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 273
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 79 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 138
Query: 272 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 93
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 139 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 198
Query: 92 XXELLQTFAREDEAALTA 39
EL+ A+EDE A A
Sbjct: 199 KQELIALHAKEDEIAAKA 216
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 271 bits (664), Expect = 8e-73
Identities = 136/198 (68%), Positives = 146/198 (73%)
Frame = -1
Query: 632 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 453
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 452 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 273
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 272 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 93
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 92 XXELLQTFAREDEAALTA 39
EL+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 271 bits (664), Expect = 8e-73
Identities = 136/198 (68%), Positives = 146/198 (73%)
Frame = -1
Query: 632 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 453
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 452 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 273
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 272 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 93
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 92 XXELLQTFAREDEAALTA 39
EL+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 268 bits (657), Expect = 6e-72
Identities = 135/198 (68%), Positives = 145/198 (73%)
Frame = -1
Query: 632 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 453
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 452 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLY 273
RVRKNTEARRK RHCGFGKR+GTANARMP K LW R +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120
Query: 272 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 93
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 92 XXELLQTFAREDEAALTA 39
EL+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 211 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRALAV 384
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
>AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-PA
protein.
Length = 267
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = +2
Query: 242 HYPSPS-CRVS-GIDACQSSWQFCTSGAIFLKPFV----FVPIVPSVAYAHWLYLFSYQS 403
H P P+ C++ G C+ + +G L P+ P V + AHW + Y
Sbjct: 128 HMPGPAACQLHVGPLDCKKVKELLKAGGCLLVPYDADVNHAPCVKNGHRAHWALIVGYLV 187
Query: 404 HSDDPFYVL 430
+ D FYVL
Sbjct: 188 DTQDRFYVL 196
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 545 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 444
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 545 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 444
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 545 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 444
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 545 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 444
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,299,328
Number of Sequences: 53049
Number of extensions: 747787
Number of successful extensions: 2650
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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