Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0639
(604 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069282-1|AAL39427.1| 433|Drosophila melanogaster GM13868p pro... 28 8.5
AM294339-1|CAL26269.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294338-1|CAL26268.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294337-1|CAL26267.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294336-1|CAL26266.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294335-1|CAL26265.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294334-1|CAL26264.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294333-1|CAL26263.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294332-1|CAL26262.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AM294331-1|CAL26261.1| 433|Drosophila melanogaster CG3831 protein. 28 8.5
AE013599-3515|AAF46934.2| 433|Drosophila melanogaster CG3831-PA... 28 8.5
>AY069282-1|AAL39427.1| 433|Drosophila melanogaster GM13868p
protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294339-1|CAL26269.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294338-1|CAL26268.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294337-1|CAL26267.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294336-1|CAL26266.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294335-1|CAL26265.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294334-1|CAL26264.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294333-1|CAL26263.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294332-1|CAL26262.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AM294331-1|CAL26261.1| 433|Drosophila melanogaster CG3831 protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
>AE013599-3515|AAF46934.2| 433|Drosophila melanogaster CG3831-PA
protein.
Length = 433
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 452 LHSSYMFNCSIQCDKDLNNKAFKLPIAKNYLC 357
L+S+ +F S+ D++ K F++PI NYLC
Sbjct: 381 LNSTLLFAASL----DMSAKLFRMPIQPNYLC 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,158,018
Number of Sequences: 53049
Number of extensions: 310374
Number of successful extensions: 707
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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