Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0637
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 34 0.36
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 34 0.36
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 34 0.36
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.36
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.36
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.36
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 34 0.36
BC142642-1|AAI42643.1| 498|Homo sapiens MRC1L1 protein protein. 31 3.3
BC139723-1|AAI39724.1| 567|Homo sapiens CLEC4F protein protein. 30 5.8
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGGDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 34.3 bits (75), Expect = 0.36
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 225 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 395
+F S +CR+LG LAS KE+ +I +T +G Y+K FW G G ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729
Query: 396 TGLP 407
G P
Sbjct: 730 DGSP 733
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>BC142642-1|AAI42643.1| 498|Homo sapiens MRC1L1 protein protein.
Length = 498
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 246 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNAT 419
CR G LAS T E+ D I + L GY D W N++ M+ S G P T
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT 446
>BC139723-1|AAI39724.1| 567|Homo sapiens CLEC4F protein protein.
Length = 567
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 240 QYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNAT 419
Q+C S G LAS +KE+ + + +K +W + GT+ + G PFNA
Sbjct: 495 QFCVSQGAHLASVASKEEQAFLVEFT-----SKVYYWIGLTDRGTEGSWRWTDGTPFNAA 549
Query: 420 FN 425
N
Sbjct: 550 QN 551
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,434,196
Number of Sequences: 237096
Number of extensions: 2092034
Number of successful extensions: 8558
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8557
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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