Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0635
(401 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 50 5e-07
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 49 1e-06
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 46 8e-06
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 42 1e-04
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 42 2e-04
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 42 2e-04
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 40 5e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 40 5e-04
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 39 0.001
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 39 0.001
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 39 0.001
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 37 0.006
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 37 0.006
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 32 0.13
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 31 0.41
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 30 0.71
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 30 0.71
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 28 2.2
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 5.0
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 6.7
U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical pr... 26 8.8
U80441-12|ABE73337.1| 147|Caenorhabditis elegans Hypothetical p... 26 8.8
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 26 8.8
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 26 8.8
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 50.4 bits (115), Expect = 5e-07
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 361
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + ++D+++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 362 ALRDLLQFMYQGE 400
+ LL F Y GE
Sbjct: 101 TVDALLSFAYTGE 113
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 194 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 367
GL +R L DVTL + + AH++VLS CSPYF MF +M + ++++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 368 RDLLQFMYQG 397
L++F Y G
Sbjct: 108 EALIEFCYTG 117
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 46.4 bits (105), Expect = 8e-06
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVS 355
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + D++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 356 HSALRDLLQFMYQGE 400
+ + LL F Y GE
Sbjct: 101 YETVDALLSFAYTGE 115
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 343
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 344 KDVSHSALRDLLQFMYQG 397
+D+ + ++ +L ++Y G
Sbjct: 247 RDIDYEVVQAILYYIYTG 264
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 343
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 344 KDVSHSALRDLLQFMYQG 397
+D+ + ++ +L ++Y G
Sbjct: 254 RDIDYEVVQAILYYIYTG 271
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 212 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 385
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 386 MY 391
+Y
Sbjct: 169 IY 170
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 212 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 385
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 386 MY 391
+Y
Sbjct: 169 IY 170
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 215 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 388
L DV L EG+ + K VL+ S +FQ+MF N + +K DV+HS DLL +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218
Query: 389 Y 391
Y
Sbjct: 219 Y 219
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 113 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 292
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 293 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQG 397
F M T + ++++ D+ + + +++ ++Y G
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCG 263
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 113 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 292
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 293 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQG 397
F M T + ++++ D+ + + +++ ++Y G
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCG 263
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Frame = +2
Query: 116 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 274
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 275 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQG 397
+ SPYF +FK + + S L +MY G
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSG 101
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Frame = +2
Query: 116 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 274
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 275 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQG 397
+ SPYF +FK + + S L +MY G
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSG 101
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Frame = +2
Query: 116 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 274
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 275 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQG 397
+ SPYF +FK + + S L +MY G
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSG 101
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 251 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQG 397
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTG 132
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 251 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQG 397
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTG 132
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 35.9 bits (79), Expect = 0.011
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 221 DVTLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 391
D + + ++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279
Query: 392 QG 397
G
Sbjct: 280 TG 281
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 32.3 bits (70), Expect = 0.13
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +2
Query: 251 LQAHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGE 400
+ AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y E
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDE 258
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 30.7 bits (66), Expect = 0.41
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 182 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 310
A + + S + D L E + L +K LS+ S YF E+FK
Sbjct: 98 AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 29.9 bits (64), Expect = 0.71
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 212 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQF 385
++ D+TL + L +K L++ SP F MF N + V L+DV R+LL
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285
Query: 386 MY 391
+Y
Sbjct: 286 IY 287
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.9 bits (64), Expect = 0.71
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 212 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPIVFLKDVSHSALRDL 376
D +V L E H VLS+ S YF+ +F + + PI LK +S + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181
Query: 377 LQFMY 391
L +Y
Sbjct: 182 LNCIY 186
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 307
+ L +G+ D+ LAA GR + HKL L + +F+ MF
Sbjct: 60 YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMF 98
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 219 TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 124
TRSP+ +P KP ++ FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical
protein F16D3.4 protein.
Length = 1232
Score = 26.6 bits (56), Expect = 6.7
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 341 KILSDV--VLDSF*TFLENRENILIELIYVLAITCLRQPTLRLRDLHATAGHESL 183
K+LS + +LDS T EN++ +L +LI +LAI L+ R+ H HE L
Sbjct: 293 KVLSFLSRLLDSIKTHHENKKLLLADLILLLAI--LKHVDRRVLTGHIGTIHEQL 345
>U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.7 protein.
Length = 192
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 149 LCWNNFHANMSAGFHGLLSRGDLVDVTL 232
LCW + +AN++A F LL+ G + T+
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTM 156
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 26.2 bits (55), Expect = 8.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 74 PVGETFEKNITQCSQ 30
P+GETF+K + CS+
Sbjct: 602 PIGETFDKTLRSCSE 616
>Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical
protein R09A8.3 protein.
Length = 817
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 212 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 307
+L D L + R + HK+VL+ SP +MF
Sbjct: 92 ELCDAVLFVKEREIFVHKVVLAAVSPALLDMF 123
>U80441-12|ABE73337.1| 147|Caenorhabditis elegans Hypothetical
protein F27C1.13 protein.
Length = 147
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 130 VGRTIFTMLEQFPR--KYVSRLSWPAVAWRSRRRN 228
+GRTI T L+QF KYV+ S P A S RRN
Sbjct: 95 MGRTIITSLDQFQHLGKYVASSSNPPKA--SLRRN 127
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 290 RENILIELIYVLAITCLRQPTLRLRDLHATAGHESLLTYLRGNCS 156
+ + L E +Y I C +Q + +D ATA S +T+L+ C+
Sbjct: 464 KNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCN 508
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 290 RENILIELIYVLAITCLRQPTLRLRDLHATAGHESLLTYLRGNCS 156
+ + L E +Y I C +Q + +D ATA S +T+L+ C+
Sbjct: 464 KNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCN 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,609,361
Number of Sequences: 27780
Number of extensions: 193885
Number of successful extensions: 388
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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