Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0635
         (401 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     103   1e-24
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          88   4e-20
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   3e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   6.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   9.2  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  103 bits (246), Expect = 1e-24
 Identities = 43/92 (46%), Positives = 64/92 (69%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEM 304
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 305 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 400
            K  P +HP++ L+DV+ S L  L++F+Y GE
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGE 92


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 87.8 bits (208), Expect = 4e-20
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +2

Query: 137 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 316
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 317 PTQHP-IVFLKDVSHSALRDLLQFMYQGE 400
           P +HP I+  +DV  + L+ +++F+Y+GE
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGE 97


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 3e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 241
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 101 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 232
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -1

Query: 368 LVQND*HLLKILSDVVLDSF*TFLENRENILIELIYVLAITCLRQPTLRLRDLHA 204
           L++++  +  I+S+++     T  E R++   E +  +  + LRQ  L +RD  A
Sbjct: 271 LIESEDAIYNIISEIIET---TIQEKRDDAKDESVEAIFQSILRQKNLDIRDKKA 322


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 102 FHVESSLSWRRTNNFHY 152
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 144 NCSSDAMIATTRRGTYPKLCTYNS 73
           NC  D +    +RGT  + C + +
Sbjct: 479 NCDIDCINRVVQRGTKMQFCIFRT 502


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 378 NKSLSAE*LTSFKNTIGCC 322
           NKS     L  FK+T  CC
Sbjct: 41  NKSSGPNELGRFKHTDACC 59


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 378 NKSLSAE*LTSFKNTIGCC 322
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 123 SWRRTNNFHY 152
           SWR T+NF Y
Sbjct: 209 SWRITHNFFY 218


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 378 NKSLSAE*LTSFKNTIGCC 322
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 102 FHVESSLSWRRTNNFHYAGTIS 167
           F V   LS  R N F  A TIS
Sbjct: 236 FGVSEDLSGDRINGFTVAQTIS 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,945
Number of Sequences: 438
Number of extensions: 2271
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)