Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0634
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    30   0.043
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    28   0.17 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.9  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   6.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.6  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   8.6  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 30.3 bits (65), Expect = 0.043
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 458 SLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLR 357
           S+  TT++  +S L+PS  + GL++   ++SFLR
Sbjct: 92  SITTTTTSTCHSHLLPSLAITGLSIGSSNSSFLR 125


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 458 SLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLR 357
           S+  TT++  +S L+PS  + GL++   ++ FLR
Sbjct: 92  SITTTTTSTCHSHLLPSLAITGLSIGSSNSRFLR 125


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 260 GIPNLPSGPLTAVTSTSSHSI 198
           G P +P+GP  + T+ S +SI
Sbjct: 251 GCPTIPAGPSKSATNHSINSI 271


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 270 RFLGDTEFAIWTPNSCYIHFLPFDRYFSCFEDFLNG 163
           R +G T  ++ T  SCY  +LP +     FE +++G
Sbjct: 53  RMVGATNESVLTVVSCYDDYLPNELLLE-FEFWISG 87


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 327  DWSHQGTLQANFIG 286
            DWS  GT  A FIG
Sbjct: 2786 DWSQPGTWNALFIG 2799


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 3   LPLVFAICENS*NGC 47
           +P++FAIC N  N C
Sbjct: 535 MPVIFAICFNILNWC 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.136    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,591
Number of Sequences: 2352
Number of extensions: 9967
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)