Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0633
(708 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 25 0.80
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 25 0.80
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 24 1.1
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 24 1.1
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 24 1.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 23 1.8
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 23 1.8
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 22 4.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.3
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 22 4.3
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 7.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 9.8
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 9.8
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 24.6 bits (51), Expect = 0.80
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 401 YNEYMTQIHSQILAEYFWKLTNRDCVKTAILFSFNFIK*IMEQNLLI 541
Y YM+ I + I+ F+K + + +LF NF ++ + LL+
Sbjct: 128 YQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLV 174
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 24.6 bits (51), Expect = 0.80
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 401 YNEYMTQIHSQILAEYFWKLTNRDCVKTAILFSFNFIK*IMEQNLLI 541
Y YM+ I + I+ F+K + + +LF NF ++ + LL+
Sbjct: 128 YQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLV 174
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 609 VLNGFNIDLFRYRKYVYEHILTLISKFCSIIYL 511
+L GF + Y Y HI+T+I+ C++ Y+
Sbjct: 150 LLEGFTL----YHTTAYLHIITMINMNCALWYI 178
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 609 VLNGFNIDLFRYRKYVYEHILTLISKFCSIIYL 511
+L GF + Y Y HI+T+I+ C++ Y+
Sbjct: 150 LLEGFTL----YHTTAYLHIITMINMNCALWYI 178
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 609 VLNGFNIDLFRYRKYVYEHILTLISKFCSIIYL 511
+L GF + Y Y HI+T+I+ C++ Y+
Sbjct: 150 LLEGFTL----YHTTAYLHIITMINMNCALWYI 178
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 588 DLFRYRKYVYEHILTLISKFCSIIYLIKLKLNKMAV 481
D+ + + Y HIL +++ CS+ ++ ++AV
Sbjct: 202 DMLLWHTFGYYHILAMLNCLCSLWFINCTAKGRVAV 237
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 588 DLFRYRKYVYEHILTLISKFCSIIYLIKLKLNKMAV 481
D+ + + Y HIL +++ CS+ ++ ++AV
Sbjct: 202 DMLLWHTFGYYHILAMLNCLCSLWFINCTAKGRVAV 237
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 530 NLLISVSICSYTYFLYLNKSILNPFNTTI 616
NLL+ + C Y L + +LN + T+
Sbjct: 191 NLLMELQYCHYLNILRVRYQLLNEYLETL 219
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 411 YSLYFSKFTS*LTVYLV 361
Y+L FSKFTS + + L+
Sbjct: 1083 YTLVFSKFTSSIRMLLI 1099
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 530 NLLISVSICSYTYFLYLNKSILNPFNTTI 616
NLL+ + C Y L + +LN + T+
Sbjct: 191 NLLMELQYCHYLNILRVRYQLLNEYLETL 219
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 446 YFWKLTNRDCVK 481
Y WK N+ CVK
Sbjct: 44 YTWKCENQKCVK 55
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 639 YYFFQSNQIVVLNGF 595
Y FF+S +V LN F
Sbjct: 444 YLFFESPPVVFLNDF 458
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 639 YYFFQSNQIVVLNGF 595
Y FF+S +V LN F
Sbjct: 444 YLFFESPPVVFLNDF 458
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 639 YYFFQSNQIVVLNGF 595
Y FF+S +V LN F
Sbjct: 444 YLFFESPPVVFLNDF 458
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 639 YYFFQSNQIVVLNGF 595
Y FF+S +V LN F
Sbjct: 444 YLFFESPPVVFLNDF 458
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 91 LQVRFIWYYHQL 126
LQ+ FIW Y+ L
Sbjct: 219 LQITFIWTYNDL 230
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 91 LQVRFIWYYHQL 126
LQ+ FIW Y+ L
Sbjct: 219 LQITFIWTYNDL 230
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,664
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -