Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0631
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    64   9e-13
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    64   9e-13
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    60   2e-11
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.5  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 64.5 bits (150), Expect = 9e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2

Query: 524 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 622
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTF 33



 Score = 49.6 bits (113), Expect = 3e-08
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +1

Query: 658 FEVKSTAGDTHLGGEDFDNRMVNH 729
           FEVK+TAGDTHLGGEDFDNR+V +
Sbjct: 45  FEVKATAGDTHLGGEDFDNRLVEY 68



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 621 FDVSILTIEDGIF 659
           FDVS+LTIE+GIF
Sbjct: 33  FDVSLLTIEEGIF 45


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 64.5 bits (150), Expect = 9e-13
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2

Query: 524 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 622
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTF 33



 Score = 49.6 bits (113), Expect = 3e-08
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +1

Query: 658 FEVKSTAGDTHLGGEDFDNRMVNH 729
           FEVK+TAGDTHLGGEDFDNR+V +
Sbjct: 45  FEVKATAGDTHLGGEDFDNRLVEY 68



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 621 FDVSILTIEDGIF 659
           FDVS+LTIE+GIF
Sbjct: 33  FDVSLLTIEEGIF 45


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 524 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 622
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTF
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLGGGTF 32



 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = +1

Query: 658 FEVKSTAGDTHLGGEDFDNRMVNHFV 735
           FEV +T+GDTHLGGEDFD +++++F+
Sbjct: 44  FEVVATSGDTHLGGEDFDQKVMDYFI 69



 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +3

Query: 621 FDVSILTIEDGIF 659
           FDVSILTI++G+F
Sbjct: 32  FDVSILTIDNGVF 44


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 296 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 421
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 67  LPAREGGDHRQRPGQQDH 120
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 479 TKDAGTISGLNVLRIINEPTAA 544
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +1

Query: 367 FH-GAYENEGNCRSL------SRQNCAECSYHGSRVLQ*LSKTSHKRCR 492
           FH GA+  EG C+S       +  + +EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,723
Number of Sequences: 336
Number of extensions: 4593
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)