Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0629
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 202 1e-52
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 198 3e-51
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 190 8e-49
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 190 8e-49
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 127 9e-30
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 127 9e-30
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 122 3e-28
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 122 3e-28
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 122 3e-28
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 120 1e-27
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 118 5e-27
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 116 2e-26
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 113 9e-26
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 111 4e-25
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 96 2e-20
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 96 2e-20
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 96 2e-20
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 92 4e-19
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 92 4e-19
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 92 4e-19
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 92 4e-19
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 91 5e-19
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 80 2e-15
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 75 5e-14
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 75 5e-14
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 71 8e-13
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 71 8e-13
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 69 4e-12
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 69 4e-12
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 69 4e-12
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.26
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 30 1.9
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 5.7
U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine rece... 28 7.5
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 9.9
U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 202 bits (494), Expect = 1e-52
Identities = 99/147 (67%), Positives = 110/147 (74%)
Frame = +2
Query: 236 MGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTE 415
M +L + +L A A+ D+ KGPKVT KV FDM+IG IG IVIGLFGKTVPKT
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 416 NFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYG 595
NF +LA+KP+GEGY GSKFHRVI +FMIQ RSIYGE+F DENFKLKHYG
Sbjct: 60 NFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYG 119
Query: 596 AGWLSMANAGKDTNGSQFFITTVKTPW 676
AGWLSMANAG DTNGSQFFITTVKTPW
Sbjct: 120 AGWLSMANAGADTNGSQFFITTVKTPW 146
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 198 bits (483), Expect = 3e-51
Identities = 93/124 (75%), Positives = 99/124 (79%)
Frame = +2
Query: 305 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 484
KGPKVT KV FDM+IG IG IVIGLFGKTVPKT NF +LA+KP+GEGY GSKFHRVI
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVI 82
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
+FMIQ RSIYGE+F DENFKLKHYGAGWLSMANAG DTNGSQFFITTV
Sbjct: 83 ADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTV 142
Query: 665 KTPW 676
KTPW
Sbjct: 143 KTPW 146
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 190 bits (463), Expect = 8e-49
Identities = 93/144 (64%), Positives = 108/144 (75%), Gaps = 2/144 (1%)
Frame = +2
Query: 251 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 424
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 425 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 604
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 605 LSMANAGKDTNGSQFFITTVKTPW 676
LSMANAG+DTNGSQFFITT KT W
Sbjct: 120 LSMANAGEDTNGSQFFITTAKTSW 143
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 190 bits (463), Expect = 8e-49
Identities = 93/144 (64%), Positives = 108/144 (75%), Gaps = 2/144 (1%)
Frame = +2
Query: 251 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 424
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 425 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 604
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
Query: 605 LSMANAGKDTNGSQFFITTVKTPW 676
LSMANAG+DTNGSQFFITT KT W
Sbjct: 120 LSMANAGEDTNGSQFFITTAKTSW 143
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 127 bits (306), Expect = 9e-30
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNGSQFFI TV
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTV 142
Query: 665 KTPW 676
TPW
Sbjct: 143 DTPW 146
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 127 bits (306), Expect = 9e-30
Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SIYG +F+DENF LKH G G LSMANAG +TNGSQFFI TV
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTV 142
Query: 665 KTPW 676
TPW
Sbjct: 143 DTPW 146
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 122 bits (293), Expect = 3e-28
Identities = 64/124 (51%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG G IV+ L+ VPKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SI+GE+F+DENFK KH G G LSMAN G +TNGSQFF+ TV
Sbjct: 65 PEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTTW 128
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 122 bits (293), Expect = 3e-28
Identities = 66/124 (53%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
NFMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+ TV
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTEW 128
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 122 bits (293), Expect = 3e-28
Identities = 66/124 (53%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
NFMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+ TV
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTEW 128
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 120 bits (288), Expect = 1e-27
Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
+V FD+ I G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+ TV
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTAW 128
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 118 bits (283), Expect = 5e-27
Identities = 63/124 (50%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
+V FD+ G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SIYGE+F DENFK KH G G LSMANAG +TNGSQFF+ TV
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTAW 128
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 116 bits (279), Expect = 2e-26
Identities = 63/119 (52%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Frame = +2
Query: 329 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 493
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 494 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT 670
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG QFFIT KT
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKT 137
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 116 bits (279), Expect = 2e-26
Identities = 63/119 (52%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Frame = +2
Query: 329 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 493
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 494 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT 670
MIQ SIYG +F DENF+LKH G G LSMANAG DTNG QFFIT KT
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKT 137
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 113 bits (273), Expect = 9e-26
Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV D+ IG G IV+ L+ PKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FMIQ SI+GE+F+DENFK KH G G LSMAN G +TNGSQFF+ TV
Sbjct: 65 PEFMIQGGDFTEGNGTG-ESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTV 123
Query: 665 KTPW 676
KT W
Sbjct: 124 KTTW 127
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 111 bits (268), Expect = 4e-25
Identities = 58/117 (49%), Positives = 69/117 (58%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQX 505
+V +KIG IG IVI L PKT ENF L G GY+GS FHR+I FM+Q
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQG 199
Query: 506 XXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPW 676
+SIYG +F+DENF L+H G +SMAN G +TNGSQFFI T KT W
Sbjct: 200 GDFTKGDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCGANTNGSQFFICTEKTDW 256
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Frame = +2
Query: 299 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 460
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 461 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 640
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 641 SQFFITTVKTP 673
SQFFIT+ + P
Sbjct: 121 SQFFITSEEVP 131
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Frame = +2
Query: 299 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 460
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 461 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 640
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 641 SQFFITTVKTP 673
SQFFIT+ + P
Sbjct: 121 SQFFITSEEVP 131
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Frame = +2
Query: 299 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 460
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 461 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 640
GS FHRVIK FMIQ SIYG F+DEN LKH LSMAN G DTNG
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNG 120
Query: 641 SQFFITTVKTP 673
SQFFIT+ + P
Sbjct: 121 SQFFITSEEVP 131
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 481
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 482 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 661
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFITT
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITT 125
Query: 662 VKTP 673
P
Sbjct: 126 AAAP 129
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 481
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 482 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 661
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFITT
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITT 125
Query: 662 VKTP 673
P
Sbjct: 126 AAAP 129
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 481
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 482 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 661
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFITT
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITT 125
Query: 662 VKTP 673
P
Sbjct: 126 AAAP 129
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 481
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 482 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 661
+K FMIQ SIYG F+DE FKLKH LSMAN G ++N SQFFITT
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITT 125
Query: 662 VKTP 673
P
Sbjct: 126 AAAP 129
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 91.5 bits (217), Expect = 5e-19
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = +2
Query: 353 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 532
D +G I + L+ P+T +NF QLA++ Y G+ FHR+I +FMIQ
Sbjct: 15 DTTMGKIALELYWNHAPRTCQNFSQLAKR---NYYNGTIFHRIIADFMIQGGDPTGTGRG 71
Query: 533 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT 670
SIYG++F DE + +LKH GAG LSMANAG +TNGSQFFIT T
Sbjct: 72 GA-SIYGDKFSDEIDERLKHTGAGILSMANAGPNTNGSQFFITLAPT 117
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 79.8 bits (188), Expect = 2e-15
Identities = 52/116 (44%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
+ G I I LFG PKT ENF +++ Y G FHRVIK+FMIQ
Sbjct: 481 SFGDITIRLFGDECPKTVENFCTHSRRGY---YNGLTFHRVIKSFMIQTGDPSGKGTGG- 536
Query: 539 RSIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTVKTPWFRWQTWLF 700
SI+GE FEDE + +L+H +SMANAG +TNGSQFFIT W + LF
Sbjct: 537 ESIWGEDFEDEFHPRLRHDKPFKVSMANAGGGNTNGSQFFITVCPADWLDGKNTLF 592
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 74.9 bits (176), Expect = 5e-14
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +2
Query: 290 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 469
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 470 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQ 646
FHR++KNF++Q SIYG+ F+DE + +LK G + MANAG+D NGSQ
Sbjct: 54 FHRLVKNFILQGGDPTATGTGG-ESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 647 FFIT 658
FF T
Sbjct: 113 FFFT 116
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 74.9 bits (176), Expect = 5e-14
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +2
Query: 290 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 469
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 470 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQ 646
FHR++KNF++Q SIYG+ F+DE + +LK G + MANAG+D NGSQ
Sbjct: 54 FHRLVKNFILQGGDPTATGTGG-ESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQ 112
Query: 647 FFIT 658
FF T
Sbjct: 113 FFFT 116
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMI-- 499
KV D+ +G +V L + PKT ENF +L P G GYK F+RVI F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVFYRVIPTFCACS 63
Query: 500 QXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAG-KDTNGSQFFITTVKTP 673
+S +G + F+DENF++ H G L M N G ++TN S+F++T +TP
Sbjct: 64 GDFETQNARRDGGKSTFGTKYFDDENFEILHDKKGILGMDNYGWENTNSSRFYVTFRETP 123
Query: 674 W 676
W
Sbjct: 124 W 124
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 539 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFIT 658
SI+ + F DE H G LSMAN G +TNGSQFFIT
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFIT 383
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 539 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFIT 658
SI+ + F DE H G LSMAN G +TNGSQFFIT
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFIT 383
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 539 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFIT 658
SI+ + F DE H G LSMAN G +TNGSQFFIT
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFIT 383
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQGGDPTGTGHGG- 342
Query: 539 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFIT 658
SI+ + F DE H G LSMAN G +TNGSQFFIT
Sbjct: 343 ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFIT 383
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/102 (44%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 544
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 545 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVK 667
I+G FEDE LKH G +SMAN G D+N SQFFIT K
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAK 107
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/102 (44%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 544
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 545 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVK 667
I+G FEDE LKH G +SMAN G D+N SQFFIT K
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAK 107
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/102 (44%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 544
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQTGDPTHSGKGG-ES 65
Query: 545 IYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVK 667
I+G FEDE LKH G +SMAN G D+N SQFFIT K
Sbjct: 66 IWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAK 107
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = +2
Query: 353 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 532
+ +G ++I LF K P+ + NF +L +K + Y ++FH + +N++ Q
Sbjct: 6 ETTLGDLIIDLFVKERPRCSLNFLKLCKK---KYYNLNQFHSIERNYVAQTGDPTGTGKG 62
Query: 533 XXR---SIYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFIT 658
+YGE+ FE E+ K++H G +S N G + GSQFFIT
Sbjct: 63 GESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFIT 111
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = +2
Query: 353 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 532
+ +G ++I LF K P+ + NF +L +K + Y ++FH + +N++ Q
Sbjct: 6 ETTLGDLIIDLFVKERPRCSLNFLKLCKK---KYYNLNQFHSIERNYVAQTGDPTGTGKG 62
Query: 533 XXR---SIYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFIT 658
+YGE+ FE E+ K++H G +S N G + GSQFFIT
Sbjct: 63 GESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFIT 111
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +2
Query: 545 IYGER---FEDENF-KLKHYGAGWLSMANAGKDTNGSQFFIT 658
+YGE+ FE E+ K++H G +S N G + GSQFFIT
Sbjct: 1 MYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFIT 42
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 29.9 bits (64), Expect = 1.9
Identities = 33/105 (31%), Positives = 39/105 (37%)
Frame = +2
Query: 329 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXX 508
V + IG G IVI LF VP+T +NF E G G H +K I+
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNFESWC-TGEKRGKYGEPLH--LKECEIKMI 155
Query: 509 XXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGS 643
E F+DE K H LSM N K N S
Sbjct: 156 LPGSVIGFGDFEENCEYFDDEKSKENHC-KNVLSM-NIDKSENSS 198
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 574 VFIFKTFTIYTAPSSSITLGKITTLDHEIFNYSVELAPFVPLPL 443
+F T Y + SIT+ K T ++F +S+ L F+PL L
Sbjct: 228 LFQVTTLIYYICIAPSITISKDTHHRQKVFLFSILLQCFIPLTL 271
>U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 56 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -1
Query: 595 TIVLQLEVFIFKTFTI---YTAPSSSITLGKITTLDHEIFNYSV 473
+IVL + +IF + + +TAP T+ +T ++H +N S+
Sbjct: 122 SIVLIIVSYIFPVYNMIIPFTAPRDFTTVQNLTAIEHSTYNLSL 165
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
protein K12D12.2 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 371 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN 490
++ LF + + T ++ F Q P+ G GSK ++++N
Sbjct: 157 VIKNLFQQLINFTVQSEFARLQSPDVNGLGGSKHQKLVRN 196
>U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical
protein W02B3.5 protein.
Length = 181
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -1
Query: 514 KITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLSK*SNHNSTNIVITNLHVK 335
K T HEIFN+ V + F L FL L++ S L+ + N I + VK
Sbjct: 54 KECTTKHEIFNFMVMASNF---NLNFLENLEKGQSKLKLVQKNRTVGNGLRITVALNEVK 110
Query: 334 AHL 326
AH+
Sbjct: 111 AHI 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,763,988
Number of Sequences: 27780
Number of extensions: 322179
Number of successful extensions: 815
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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