Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0629
(709 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 152 2e-37
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 149 1e-36
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 147 5e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 141 5e-34
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 138 3e-33
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 122 2e-28
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 120 7e-28
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 120 1e-27
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 116 1e-26
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 116 2e-26
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 113 1e-25
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 110 1e-24
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 110 1e-24
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 108 3e-24
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 108 3e-24
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 86 2e-17
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 82 3e-16
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 7e-16
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 75 5e-14
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 73 1e-13
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 59 3e-09
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 55 5e-08
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 50 2e-06
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 36 0.020
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 30 1.3
At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative (CH... 29 3.0
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 29 3.0
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 29 3.0
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 28 5.3
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 27 9.2
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 27 9.2
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 27 9.2
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 152 bits (369), Expect = 2e-37
Identities = 84/160 (52%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Frame = +2
Query: 218 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 397
+ + L++ +L + LG L I + KS E K ++THKV FD++I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 398 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 556
VPKT ENF L +G G YKGS FHR+I +FM+Q SIYGE
Sbjct: 60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGE 119
Query: 557 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPW 676
+F DENFKLKH G G+LSMANAG+DTNGSQFFITTV T W
Sbjct: 120 KFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSW 159
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 149 bits (362), Expect = 1e-36
Identities = 75/134 (55%), Positives = 90/134 (67%)
Frame = +2
Query: 275 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 454
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 455 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 634
YKGS FHR+IK+FMIQ SIYG +FEDENF LKH G G LSMANAG +T
Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198
Query: 635 NGSQFFITTVKTPW 676
NGSQFFI TVKT W
Sbjct: 199 NGSQFFICTVKTSW 212
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 147 bits (357), Expect = 5e-36
Identities = 79/141 (56%), Positives = 93/141 (65%), Gaps = 7/141 (4%)
Frame = +2
Query: 275 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 454
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 455 -------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSM 613
YKGSKFHR+I +FMIQ SIYG++F DENFKLKH G G LSM
Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSM 135
Query: 614 ANAGKDTNGSQFFITTVKTPW 676
AN+G+DTNGSQFFITTV T W
Sbjct: 136 ANSGEDTNGSQFFITTVTTSW 156
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 141 bits (341), Expect = 5e-34
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Frame = +2
Query: 314 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 484
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
++FMIQ +S+YG F+DENFKL H G G LSMANAG +TNGSQFFI T+
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 665 KTPW 676
KT W
Sbjct: 207 KTSW 210
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 138 bits (334), Expect = 3e-33
Identities = 73/142 (51%), Positives = 89/142 (62%), Gaps = 8/142 (5%)
Frame = +2
Query: 275 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 451
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 452 G-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 610
G +KGS FHR+I FMIQ SIYG++F DENFKLKH G G+LS
Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLS 161
Query: 611 MANAGKDTNGSQFFITTVKTPW 676
MAN+G D+NGSQFFITTV T W
Sbjct: 162 MANSGPDSNGSQFFITTVTTSW 183
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 122 bits (295), Expect = 2e-28
Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 8/160 (5%)
Frame = +2
Query: 221 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 397
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 398 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 556
VPKT ENF L +G+ YKG+ FHR+I F+IQ SIYG
Sbjct: 72 VPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGG 131
Query: 557 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPW 676
F DENFK++H AG ++MAN G D+NGSQFFITTVK W
Sbjct: 132 TFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASW 171
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 120 bits (290), Expect = 7e-28
Identities = 66/124 (53%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 665 KTPW 676
KT W
Sbjct: 126 KTDW 129
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 120 bits (288), Expect = 1e-27
Identities = 65/124 (52%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTDW 128
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 116 bits (280), Expect = 1e-26
Identities = 63/124 (50%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FM Q SIYG +F+DENF KH G G LSMANAG +TNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 665 KTPW 676
KT W
Sbjct: 126 KTSW 129
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 116 bits (279), Expect = 2e-26
Identities = 62/124 (50%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FM Q SIYG +FEDENFKLKH G G LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTSW 128
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 113 bits (271), Expect = 1e-25
Identities = 62/123 (50%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 481
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 482 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 661
IK FMIQ SIYG +F+DENF+LKH G LSMAN+G +TNGSQFFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 662 VKT 670
+T
Sbjct: 125 TRT 127
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 110 bits (264), Expect = 1e-24
Identities = 61/124 (49%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 664
FM Q SIYG +F+DENF KH GAG LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 665 KTPW 676
KT W
Sbjct: 125 KTSW 128
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 110 bits (264), Expect = 1e-24
Identities = 62/130 (47%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +2
Query: 302 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGS 466
P PK V FD+ IG G I + LF PKT ENF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 467 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQ 646
+FHRVIK+FM+Q SIYG +FEDENF KH G G LSMAN+G +TNG Q
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQ 144
Query: 647 FFITTVKTPW 676
FFIT K W
Sbjct: 145 FFITCAKCDW 154
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 108 bits (260), Expect = 3e-24
Identities = 62/128 (48%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Frame = +2
Query: 314 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 469
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 470 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 649
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 650 FITTVKTP 673
FI + P
Sbjct: 124 FILFKRQP 131
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 108 bits (260), Expect = 3e-24
Identities = 62/128 (48%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Frame = +2
Query: 314 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 469
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 470 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 649
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 650 FITTVKTP 673
FI + P
Sbjct: 124 FILFKRQP 131
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 353 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 532
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 533 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 673
SIYG +FEDE N +LKH GAG LSMANAG +TNGSQFFIT P
Sbjct: 72 G-ESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQP 118
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 82.2 bits (194), Expect = 3e-16
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +2
Query: 362 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 541
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539
Query: 542 SIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPW 676
SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPW
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPW 585
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 81.0 bits (191), Expect = 7e-16
Identities = 49/106 (46%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPKGTGKGGT 64
Query: 539 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 673
SI+G++F DE LKH G LSMAN+G +TNGSQFFIT K P
Sbjct: 65 -SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQP 109
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/121 (41%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 296 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 475
++ K PK V F GD NI L P+ ENF L ++ Y G FH
Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386
Query: 476 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFF 652
R I+NFMIQ SI+G+ F+DE N KL H G G +SMAN+G TNGSQFF
Sbjct: 387 RSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFF 445
Query: 653 I 655
+
Sbjct: 446 V 446
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 73.3 bits (172), Expect = 1e-13
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Frame = +2
Query: 314 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 469
K +V D+ I D T+V LF + PKT+ENF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 470 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 649
FHR++K Q SIY +F DE+ KL+H G LSM+ A +D GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 650 FIT 658
IT
Sbjct: 124 HIT 126
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 58.8 bits (136), Expect = 3e-09
Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 541
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 542 SIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTVKTPW 676
SIYG F DE + +L+ G ++MANA ++NGSQFF T K W
Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDW 123
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 54.8 bits (126), Expect = 5e-08
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Frame = +2
Query: 326 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 484
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 485 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHY-GAGWLSMANAGKDTNGSQFFI 655
+ M I+ E +DE F L H G G +SMA D+NGSQF I
Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQI 114
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = +2
Query: 359 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 538
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 539 ---RSIYGER---FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 658
+ +YGE+ ++DE + LKH G ++MA+ G++ N SQF+ T
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFT 111
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Frame = +2
Query: 215 RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH--------KVSFDMKIGDDNIGT 370
++ L+L++ T T L LL + A++D I P +T+ K D+ I + IG
Sbjct: 50 KSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTKKAFIDVSIDGEPIGR 107
Query: 371 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 496
I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 108 IIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 502
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 502
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 365 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 502
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 353 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 502
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 362 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 481
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative
(CHX25) similar to Na+/H+-exchanging protein slr1595,
Synechocystis sp., PIR:S74951; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 857
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -2
Query: 405 LGTVFPNNP-ITIVPILSSPIFMSKLTL*VTLGPLGISSDLALAMNNKIPKAIVRVPMIK 229
LG V P+ P + + S F+++ + + +G +++ L PK I P+I
Sbjct: 329 LGLVVPHGPPLGSTLAIRSETFVNEFLMPFSFALVGQKTNVNLISKETWPKQIS--PLIY 386
Query: 228 TSLVRFLAIFTKFVSNVYFFKI 163
S+V F+ F FFK+
Sbjct: 387 MSIVGFVTKFVSSTGAALFFKV 408
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 233 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 412
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 413 ENFFQ---LAQKPEGEGYKGS 466
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 233 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 412
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 413 ENFFQ---LAQKPEGEGYKGS 466
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 542 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTVKTP 673
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 469
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 470 FHRV 481
F R+
Sbjct: 429 FPRI 432
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 469
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 470 FHRV 481
F R+
Sbjct: 429 FPRI 432
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 469
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 470 FHRV 481
F R+
Sbjct: 429 FPRI 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,773,635
Number of Sequences: 28952
Number of extensions: 294092
Number of successful extensions: 665
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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