Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0624
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    28   8.7  

>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 424  LSWKKYINLIMPVY*SRALHAYCVSVVIRILNK 522
            + W +Y N I+ +   RA HA  V+ + R+L K
Sbjct: 903  IEWPQYCNHILQISHLRATHAELVAAIERVLAK 935


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,577
Number of Sequences: 37544
Number of extensions: 289892
Number of successful extensions: 434
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)