Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0621
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   1.9  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   1.9  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.4  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 705 RKVI*MLTLSYVLIESALPLRSF*NTANGIGFLTYRVLSPIHSTLNLT-YSYELSNESPH 529
           RKV    TL+ VLI+    L +    A+ +  LT   ++ +  T ++T + Y   N    
Sbjct: 40  RKVYSWWTLAMVLIQFFAILGNLATNADDVNELTANTITTLFFTHSVTKFIYFAVNSENF 99

Query: 528 QNPRLSWNRTHNN 490
                 WN+T+ +
Sbjct: 100 YRTLAIWNQTNTH 112


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 705 RKVI*MLTLSYVLIESALPLRSF*NTANGIGFLTYRVLSPIHSTLNLT-YSYELSNESPH 529
           RKV    TL+ VLI+    L +    A+ +  LT   ++ +  T ++T + Y   N    
Sbjct: 40  RKVYSWWTLAMVLIQFFAILGNLATNADDVNELTANTITTLFFTHSVTKFIYFAVNSENF 99

Query: 528 QNPRLSWNRTHNN 490
                 WN+T+ +
Sbjct: 100 YRTLAIWNQTNTH 112


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 3   PRPSEPKPTSPARGAPCRPTNEALARRGRHGT 98
           P  SEP  T       C PT   L     HGT
Sbjct: 273 PTTSEPPSTPHPTDPHCPPTGATLPNYWAHGT 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,063
Number of Sequences: 2352
Number of extensions: 13850
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)