Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0617
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 280 KRHLYLILSYKYLP 321
           K+H+Y ++S  YLP
Sbjct: 27  KQHIYSLISLSYLP 40


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 429 YFYNLSELYTNYIRPSGVVVSDMVTTQGGRGF 334
           YF+ LS +YT Y R    +   +    G  GF
Sbjct: 87  YFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGF 118


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 429 YFYNLSELYTNYIRPSGVVVSDMVTTQGGRGF 334
           YF+ LS +YT Y R    +   +    G  GF
Sbjct: 43  YFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGF 74


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 280 KRHLYLILSYKYLP 321
           K+H+Y ++S  YLP
Sbjct: 27  KQHIYSLISLSYLP 40


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 449 PSVKANISLVSLITIKKC 502
           P + +NISLVSLI +  C
Sbjct: 234 PFLISNISLVSLIFLFNC 251


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 561 HIRCYSHLCNFF 526
           H+R +  LCNF+
Sbjct: 534 HVRAFLGLCNFY 545


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 534 CISDYSTVCAICESKKKI 587
           CI  +  +C +C+S  +I
Sbjct: 516 CIRSHDKLCDVCDSVNRI 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,466
Number of Sequences: 336
Number of extensions: 4485
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)