Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0617
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450 pr...    24   4.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   6.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.9  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   7.9  

>AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450
           protein.
          Length = 107

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 676 RT*LMKVIDNSHRRPPPGKE 735
           +T + +V+ N H  P PGKE
Sbjct: 64  KTVIARVLQNFHLSPAPGKE 83


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 YHINIFPWRDSNPRPP 349
           Y + + PW+D N  PP
Sbjct: 928 YALRLLPWQDRNNLPP 943


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 600 LFIMESFF*IHISHIRCYSHLCNF 529
           ++  ESFF + + H R  S LC F
Sbjct: 768 MYTGESFFAVLLQHERTQSELCLF 791


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 600 LFIMESFF*IHISHIRCYSHLCNF 529
           ++  ESFF + + H R  S LC F
Sbjct: 769 MYTGESFFAVLLQHERTQSELCLF 792


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 338 PRPPCVVTMSLTTTPDGRI 394
           P+PP   ++ L+TTP+  I
Sbjct: 1   PKPPLTKSLQLSTTPEYHI 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,962
Number of Sequences: 2352
Number of extensions: 15448
Number of successful extensions: 82
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)